RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
MBD4-201ENST00000249910 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
MBD4-201ENST00000249910 BACH2Q9BYV9 841 aa18.93■□□□□ 0.62
MBD4-201ENST00000249910 IL16Q14005 1332 aa18.93■□□□□ 0.62
MBD4-201ENST00000249910 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
MBD4-201ENST00000249910 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
MBD4-201ENST00000249910 OVOS2A0A0J9YW53 1432 aa18.92■□□□□ 0.62
MBD4-201ENST00000249910 TRIM27P14373 513 aa18.92■□□□□ 0.62
MBD4-201ENST00000249910 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
MBD4-201ENST00000249910 OVOS2Q6IE36 1432 aa18.92■□□□□ 0.62
MBD4-201ENST00000249910 FTSJ3Q8IY81 847 aaKnown RBP18.92■□□□□ 0.62
MBD4-201ENST00000249910 NOB1Q9ULX3 412 aaKnown RBP18.92■□□□□ 0.62
MBD4-201ENST00000249910 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 PAK3O75914 559 aaPredicted RBP18.91■□□□□ 0.62
MBD4-201ENST00000249910 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
MBD4-201ENST00000249910 MAP3K19Q56UN5 1328 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 MS4A1P11836 297 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 NLRP6P59044 892 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
MBD4-201ENST00000249910 SSH2Q76I76 1423 aa18.9■□□□□ 0.62
MBD4-201ENST00000249910 DZIP1LQ8IYY4 767 aaKnown RBP18.9■□□□□ 0.62
MBD4-201ENST00000249910 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
MBD4-201ENST00000249910 DIP2AQ14689 1571 aa18.89■□□□□ 0.61
MBD4-201ENST00000249910 C14orf37Q86TY3 774 aa18.89■□□□□ 0.61
MBD4-201ENST00000249910 MBIPQ9NS73 344 aa18.88■□□□□ 0.61
MBD4-201ENST00000249910 RGPD8O14715 1765 aaPredicted RBP18.87■□□□□ 0.61
MBD4-201ENST00000249910 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
MBD4-201ENST00000249910 MVPQ14764 893 aaKnown RBP18.87■□□□□ 0.61
MBD4-201ENST00000249910 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 TOPAZ1Q8N9V7 1692 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 ITPRIPQ8IWB1 547 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 ABTB2Q8N961 1025 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
MBD4-201ENST00000249910 AMPHP49418 695 aa18.85■□□□□ 0.61
MBD4-201ENST00000249910 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
MBD4-201ENST00000249910 MCM10Q7L590 875 aa18.85■□□□□ 0.61
MBD4-201ENST00000249910 NRKQ7Z2Y5 1582 aa18.84■□□□□ 0.61
MBD4-201ENST00000249910 VAMP4O75379 141 aa18.84■□□□□ 0.61
MBD4-201ENST00000249910 FOXO3O43524 673 aa18.83■□□□□ 0.61
MBD4-201ENST00000249910 GNAI1P63096 354 aa18.83■□□□□ 0.61
MBD4-201ENST00000249910 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.61
MBD4-201ENST00000249910 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.61
MBD4-201ENST00000249910 ZNF853P0CG23 659 aa18.83■□□□□ 0.6
MBD4-201ENST00000249910 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
MBD4-201ENST00000249910 IFT57Q9NWB7 429 aa18.83■□□□□ 0.6
MBD4-201ENST00000249910 PIK3R4Q99570 1358 aa18.83■□□□□ 0.6
MBD4-201ENST00000249910 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
MBD4-201ENST00000249910 XRN1Q8IZH2 1706 aaKnown RBP18.82■□□□□ 0.6
MBD4-201ENST00000249910 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
MBD4-201ENST00000249910 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
MBD4-201ENST00000249910 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
MBD4-201ENST00000249910 LTV1Q96GA3 475 aaPredicted RBP18.81■□□□□ 0.6
MBD4-201ENST00000249910 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
MBD4-201ENST00000249910 EYA1Q99502 592 aa18.8■□□□□ 0.6
MBD4-201ENST00000249910 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
MBD4-201ENST00000249910 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
MBD4-201ENST00000249910 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
MBD4-201ENST00000249910 TWISTNBQ3B726 338 aaPredicted RBP18.8■□□□□ 0.6
MBD4-201ENST00000249910 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
MBD4-201ENST00000249910 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
MBD4-201ENST00000249910 FLT4P35916 1363 aa18.78■□□□□ 0.6
MBD4-201ENST00000249910 ALDH1L2Q3SY69 923 aa18.78■□□□□ 0.6
MBD4-201ENST00000249910 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
MBD4-201ENST00000249910 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
MBD4-201ENST00000249910 IPO8O15397 1037 aaKnown RBP18.77■□□□□ 0.6
MBD4-201ENST00000249910 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
MBD4-201ENST00000249910 SBNO1A3KN83 1393 aa18.77■□□□□ 0.6
MBD4-201ENST00000249910 FAM161AQ3B820 660 aa18.77■□□□□ 0.59
MBD4-201ENST00000249910 DDX19BQ9UMR2 479 aa18.77■□□□□ 0.59
MBD4-201ENST00000249910 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.59
MBD4-201ENST00000249910 ANKARQ7Z5J8 1434 aa18.76■□□□□ 0.59
MBD4-201ENST00000249910 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
MBD4-201ENST00000249910 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
MBD4-201ENST00000249910 PSME1Q06323 249 aa18.76■□□□□ 0.59
MBD4-201ENST00000249910 HOXC9P31274 260 aa18.76■□□□□ 0.59
MBD4-201ENST00000249910 MRPL50Q8N5N7 158 aaKnown RBP18.76■□□□□ 0.59
MBD4-201ENST00000249910 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
MBD4-201ENST00000249910 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
MBD4-201ENST00000249910 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
MBD4-201ENST00000249910 AAMPQ13685 434 aa18.74■□□□□ 0.59
MBD4-201ENST00000249910 PIK3C2AO00443 1686 aa18.74■□□□□ 0.59
MBD4-201ENST00000249910 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
MBD4-201ENST00000249910 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
MBD4-201ENST00000249910 ZBTB40Q9NUA8 1239 aa18.74■□□□□ 0.59
MBD4-201ENST00000249910 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
MBD4-201ENST00000249910 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
MBD4-201ENST00000249910 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
MBD4-201ENST00000249910 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
MBD4-201ENST00000249910 ZNF428Q96B54 188 aa18.72■□□□□ 0.59
MBD4-201ENST00000249910 CHL1O00533 1208 aa18.72■□□□□ 0.59
MBD4-201ENST00000249910 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
MBD4-201ENST00000249910 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
MBD4-201ENST00000249910 CHD2O14647 1828 aaKnown RBP18.71■□□□□ 0.59
MBD4-201ENST00000249910 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
MBD4-201ENST00000249910 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
MBD4-201ENST00000249910 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
MBD4-201ENST00000249910 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
MBD4-201ENST00000249910 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms