RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
SNAI1-201ENST00000244050 ORAI2Q96SN7 254 aa16.49■□□□□ 0.23
SNAI1-201ENST00000244050 SOS2Q07890 1332 aaPredicted RBP16.48■□□□□ 0.23
SNAI1-201ENST00000244050 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
SNAI1-201ENST00000244050 PMFBP1Q8TBY8 1022 aa16.48■□□□□ 0.23
SNAI1-201ENST00000244050 COG3Q96JB2 828 aa16.48■□□□□ 0.23
SNAI1-201ENST00000244050 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
SNAI1-201ENST00000244050 RGS12O14924 1447 aa16.48■□□□□ 0.23
SNAI1-201ENST00000244050 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
SNAI1-201ENST00000244050 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
SNAI1-201ENST00000244050 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
SNAI1-201ENST00000244050 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
SNAI1-201ENST00000244050 QTRT2Q9H974 415 aaKnown RBP16.46■□□□□ 0.23
SNAI1-201ENST00000244050 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
SNAI1-201ENST00000244050 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
SNAI1-201ENST00000244050 BCAR3O75815 825 aa16.44■□□□□ 0.22
SNAI1-201ENST00000244050 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
SNAI1-201ENST00000244050 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
SNAI1-201ENST00000244050 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
SNAI1-201ENST00000244050 U2AF1L5P0DN76 240 aaPredicted RBP16.43■□□□□ 0.22
SNAI1-201ENST00000244050 U2AF1Q01081 240 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNAI1-201ENST00000244050 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
SNAI1-201ENST00000244050 FBLN1P23142 703 aa16.43■□□□□ 0.22
SNAI1-201ENST00000244050 PDE4AP27815 886 aa16.43■□□□□ 0.22
SNAI1-201ENST00000244050 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
SNAI1-201ENST00000244050 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
SNAI1-201ENST00000244050 BACH2Q9BYV9 841 aa16.43■□□□□ 0.22
SNAI1-201ENST00000244050 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
SNAI1-201ENST00000244050 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
SNAI1-201ENST00000244050 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
SNAI1-201ENST00000244050 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
SNAI1-201ENST00000244050 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
SNAI1-201ENST00000244050 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
SNAI1-201ENST00000244050 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
SNAI1-201ENST00000244050 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
SNAI1-201ENST00000244050 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
SNAI1-201ENST00000244050 NGLY1Q96IV0 654 aa16.41■□□□□ 0.22
SNAI1-201ENST00000244050 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
SNAI1-201ENST00000244050 PLEKHF1Q96S99 279 aa16.4■□□□□ 0.22
SNAI1-201ENST00000244050 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
SNAI1-201ENST00000244050 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.22
SNAI1-201ENST00000244050 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
SNAI1-201ENST00000244050 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
SNAI1-201ENST00000244050 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
SNAI1-201ENST00000244050 PXDNQ92626 1479 aa16.38■□□□□ 0.21
SNAI1-201ENST00000244050 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
SNAI1-201ENST00000244050 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
SNAI1-201ENST00000244050 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
SNAI1-201ENST00000244050 AAMPQ13685 434 aa16.37■□□□□ 0.21
SNAI1-201ENST00000244050 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
SNAI1-201ENST00000244050 USP21Q9UK80 565 aa16.37■□□□□ 0.21
SNAI1-201ENST00000244050 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
SNAI1-201ENST00000244050 ATRNO75882 1429 aa16.36■□□□□ 0.21
SNAI1-201ENST00000244050 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
SNAI1-201ENST00000244050 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
SNAI1-201ENST00000244050 NPHP3Q7Z494 1330 aa16.36■□□□□ 0.21
SNAI1-201ENST00000244050 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
SNAI1-201ENST00000244050 USP54Q70EL1 1684 aa16.35■□□□□ 0.21
SNAI1-201ENST00000244050 FOXO3O43524 673 aa16.34■□□□□ 0.21
SNAI1-201ENST00000244050 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
SNAI1-201ENST00000244050 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
SNAI1-201ENST00000244050 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
SNAI1-201ENST00000244050 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
SNAI1-201ENST00000244050 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
SNAI1-201ENST00000244050 IL16Q14005 1332 aa16.33■□□□□ 0.21
SNAI1-201ENST00000244050 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
SNAI1-201ENST00000244050 SOX12O15370 315 aa16.33■□□□□ 0.2
SNAI1-201ENST00000244050 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.2
SNAI1-201ENST00000244050 PEAK1Q9H792 1746 aa16.32■□□□□ 0.2
SNAI1-201ENST00000244050 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
SNAI1-201ENST00000244050 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
SNAI1-201ENST00000244050 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
SNAI1-201ENST00000244050 FCHSD2O94868 740 aa16.31■□□□□ 0.2
SNAI1-201ENST00000244050 IL13P35225 146 aa16.31■□□□□ 0.2
SNAI1-201ENST00000244050 NLRP6P59044 892 aa16.31■□□□□ 0.2
SNAI1-201ENST00000244050 CLUAP1Q96AJ1 413 aa16.31■□□□□ 0.2
SNAI1-201ENST00000244050 KIF1AQ12756 1690 aa16.31■□□□□ 0.2
SNAI1-201ENST00000244050 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 ABTB2Q8N961 1025 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
SNAI1-201ENST00000244050 EP400Q96L91 3159 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 NEFMP07197 916 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 PSME1Q06323 249 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 COG6Q9Y2V7 657 aa16.3■□□□□ 0.2
SNAI1-201ENST00000244050 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
SNAI1-201ENST00000244050 HMOX1P09601 288 aa16.28■□□□□ 0.2
SNAI1-201ENST00000244050 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
SNAI1-201ENST00000244050 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
SNAI1-201ENST00000244050 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
SNAI1-201ENST00000244050 IGHDP01880 384 aa16.27■□□□□ 0.2
SNAI1-201ENST00000244050 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.19
SNAI1-201ENST00000244050 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.19
SNAI1-201ENST00000244050 RIPK4P57078 832 aa16.27■□□□□ 0.19
SNAI1-201ENST00000244050 FAM161AQ3B820 660 aa16.27■□□□□ 0.19
SNAI1-201ENST00000244050 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
SNAI1-201ENST00000244050 FLT4P35916 1363 aa16.26■□□□□ 0.19
SNAI1-201ENST00000244050 AMPHP49418 695 aa16.25■□□□□ 0.19
SNAI1-201ENST00000244050 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
SNAI1-201ENST00000244050 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms