RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 FOXD4L4Q8WXT5 416 aaPredicted RBP23.08■■□□□ 1.29
CHPF-201ENST00000243776 GCC1Q96CN9 775 aa23.08■■□□□ 1.29
CHPF-201ENST00000243776 MCTP1Q6DN14 999 aa23.08■■□□□ 1.29
CHPF-201ENST00000243776 SMARCA5O60264 1052 aaPredicted RBP23.08■■□□□ 1.28
CHPF-201ENST00000243776 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.28
CHPF-201ENST00000243776 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
CHPF-201ENST00000243776 USP32Q8NFA0 1604 aa23.07■■□□□ 1.28
CHPF-201ENST00000243776 PUS7Q96PZ0 661 aaKnown RBP23.06■■□□□ 1.28
CHPF-201ENST00000243776 RRS1Q15050 365 aaKnown RBP23.06■■□□□ 1.28
CHPF-201ENST00000243776 CIZ1Q9ULV3 898 aaPredicted RBP23.06■■□□□ 1.28
CHPF-201ENST00000243776 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
CHPF-201ENST00000243776 ARHGEF28Q8N1W1 1705 aaKnown RBP23.05■■□□□ 1.28
CHPF-201ENST00000243776 CDC45O75419 566 aa23.05■■□□□ 1.28
CHPF-201ENST00000243776 HSP90AA2PQ14568 343 aaPredicted RBP23.05■■□□□ 1.28
CHPF-201ENST00000243776 BAG4O95429 457 aaKnown RBP23.05■■□□□ 1.28
CHPF-201ENST00000243776 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
CHPF-201ENST00000243776 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
CHPF-201ENST00000243776 NME9Q86XW9 330 aa23.04■■□□□ 1.28
CHPF-201ENST00000243776 NASPP49321 788 aaPredicted RBP23.03■■□□□ 1.28
CHPF-201ENST00000243776 CAVIN1Q6NZI2 390 aaKnown RBP23.03■■□□□ 1.28
CHPF-201ENST00000243776 PLEKHM2Q8IWE5 1019 aa23.03■■□□□ 1.28
CHPF-201ENST00000243776 GOLGA6L22H0YM25 854 aa23.02■■□□□ 1.28
CHPF-201ENST00000243776 SKOR2Q2VWA4 1001 aaPredicted RBP23.02■■□□□ 1.28
CHPF-201ENST00000243776 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
CHPF-201ENST00000243776 GNAI1P63096 354 aa23.01■■□□□ 1.27
CHPF-201ENST00000243776 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
CHPF-201ENST00000243776 FRMPD1Q5SYB0 1578 aa23.01■■□□□ 1.27
CHPF-201ENST00000243776 ABCC3O15438 1527 aa23■■□□□ 1.27
CHPF-201ENST00000243776 ZGPATQ8N5A5 531 aaKnown RBP23■■□□□ 1.27
CHPF-201ENST00000243776 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
CHPF-201ENST00000243776 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
CHPF-201ENST00000243776 RBM27Q9P2N5 1060 aaKnown RBP22.99■■□□□ 1.27
CHPF-201ENST00000243776 NEXMIFQ5QGS0 1516 aa22.99■■□□□ 1.27
CHPF-201ENST00000243776 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
CHPF-201ENST00000243776 SOX12O15370 315 aa22.97■■□□□ 1.27
CHPF-201ENST00000243776 ABCC4O15439 1325 aa22.96■■□□□ 1.27
CHPF-201ENST00000243776 IFT57Q9NWB7 429 aa22.96■■□□□ 1.27
CHPF-201ENST00000243776 POGZQ7Z3K3 1410 aa22.96■■□□□ 1.27
CHPF-201ENST00000243776 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
CHPF-201ENST00000243776 PRPF40AO75400 957 aaKnown RBP22.96■■□□□ 1.27
CHPF-201ENST00000243776 NOL8Q76FK4 1167 aaKnown RBP22.96■■□□□ 1.27
CHPF-201ENST00000243776 CFAP74Q9C0B2 1584 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 TSHZ3Q63HK5 1081 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 IL13P35225 146 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 TTC22Q5TAA0 569 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 ARHGAP45Q92619 1136 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 ANP32BQ92688 251 aaKnown RBP22.95■■□□□ 1.26
CHPF-201ENST00000243776 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
CHPF-201ENST00000243776 FOXD4L6Q3SYB3 417 aaPredicted RBP22.94■■□□□ 1.26
CHPF-201ENST00000243776 TPRNQ4KMQ1 711 aa22.94■■□□□ 1.26
CHPF-201ENST00000243776 FOXD4L3Q6VB84 417 aaPredicted RBP22.94■■□□□ 1.26
CHPF-201ENST00000243776 USP26Q9BXU7 913 aa22.94■■□□□ 1.26
CHPF-201ENST00000243776 ISY1Q9ULR0 285 aaKnown RBP22.94■■□□□ 1.26
CHPF-201ENST00000243776 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
CHPF-201ENST00000243776 SDSP20132 328 aa22.94■■□□□ 1.26
CHPF-201ENST00000243776 CALD1Q05682 793 aaKnown RBP22.94■■□□□ 1.26
CHPF-201ENST00000243776 PTPRMP28827 1452 aa22.94■■□□□ 1.26
CHPF-201ENST00000243776 MED14O60244 1454 aa22.93■■□□□ 1.26
CHPF-201ENST00000243776 KLHL40Q2TBA0 621 aa22.93■■□□□ 1.26
CHPF-201ENST00000243776 MCM10Q7L590 875 aa22.93■■□□□ 1.26
CHPF-201ENST00000243776 API5Q9BZZ5 524 aaKnown RBP22.93■■□□□ 1.26
CHPF-201ENST00000243776 CHMP4BQ9H444 224 aaKnown RBP22.93■■□□□ 1.26
CHPF-201ENST00000243776 CFAP44Q96MT7 982 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 KIAA1211Q6ZU35 1233 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 NUTM2FA1L443 756 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 ZNF853P0CG23 659 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 BRPF1P55201 1214 aaPredicted RBP22.92■■□□□ 1.26
CHPF-201ENST00000243776 RABEP1Q15276 862 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 DCTPP1Q9H773 170 aa22.92■■□□□ 1.26
CHPF-201ENST00000243776 ZSCAN23Q3MJ62 389 aa22.91■■□□□ 1.26
CHPF-201ENST00000243776 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
CHPF-201ENST00000243776 SLC4A10Q6U841 1118 aa22.91■■□□□ 1.26
CHPF-201ENST00000243776 MEIS3Q99687 375 aa22.91■■□□□ 1.26
CHPF-201ENST00000243776 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
CHPF-201ENST00000243776 CCDC173Q0VFZ6 552 aa22.9■■□□□ 1.26
CHPF-201ENST00000243776 RBSNQ9H1K0 784 aa22.9■■□□□ 1.26
CHPF-201ENST00000243776 PTCH1Q13635 1447 aa22.9■■□□□ 1.26
CHPF-201ENST00000243776 LMBRD1Q9NUN5 540 aa22.9■■□□□ 1.26
CHPF-201ENST00000243776 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
CHPF-201ENST00000243776 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.26
CHPF-201ENST00000243776 RBM10P98175 930 aaKnown RBP22.89■■□□□ 1.25
CHPF-201ENST00000243776 NSFL1CQ9UNZ2 370 aaKnown RBP22.88■■□□□ 1.25
CHPF-201ENST00000243776 MSNP26038 577 aaKnown RBP22.88■■□□□ 1.25
CHPF-201ENST00000243776 INTS3Q68E01 1043 aaKnown RBP22.88■■□□□ 1.25
CHPF-201ENST00000243776 F6X3S4 739 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 SULT6B1Q6IMI4 303 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 TXNDC2Q86VQ3 553 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 RNF214Q8ND24 703 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 PIK3C2BO00750 1634 aa22.87■■□□□ 1.25
CHPF-201ENST00000243776 PIK3R4Q99570 1358 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 MLH3Q9UHC1 1453 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 PTMSP20962 102 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 CEP85Q6P2H3 762 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 GPT2Q8TD30 523 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 ARID3AQ99856 593 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 ZSCAN30Q86W11 494 aa22.86■■□□□ 1.25
CHPF-201ENST00000243776 MLECQ14165 292 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms