RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 KDM5CP41229 1560 aa13.25□□□□□ -0.29
CCDC170-201ENST00000239374 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
CCDC170-201ENST00000239374 A0A0G2JS52 829 aa13.25□□□□□ -0.29
CCDC170-201ENST00000239374 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
CCDC170-201ENST00000239374 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
CCDC170-201ENST00000239374 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 ADGRL2O95490 1459 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 IL1RAPL2Q9NP60 686 aa13.24□□□□□ -0.29
CCDC170-201ENST00000239374 RPGRIP1LQ68CZ1 1315 aa13.23□□□□□ -0.29
CCDC170-201ENST00000239374 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
CCDC170-201ENST00000239374 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
CCDC170-201ENST00000239374 FOSBP53539 338 aa13.23□□□□□ -0.29
CCDC170-201ENST00000239374 TEFQ10587 303 aa13.23□□□□□ -0.29
CCDC170-201ENST00000239374 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
CCDC170-201ENST00000239374 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
CCDC170-201ENST00000239374 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
CCDC170-201ENST00000239374 IL16Q14005 1332 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 NOS1P29475 1434 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
CCDC170-201ENST00000239374 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 FBLN1P23142 703 aa13.22□□□□□ -0.29
CCDC170-201ENST00000239374 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
CCDC170-201ENST00000239374 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
CCDC170-201ENST00000239374 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
CCDC170-201ENST00000239374 MIS18AQ9NYP9 233 aa13.21□□□□□ -0.29
CCDC170-201ENST00000239374 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
CCDC170-201ENST00000239374 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
CCDC170-201ENST00000239374 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.29
CCDC170-201ENST00000239374 OFD1O75665 1012 aa13.21□□□□□ -0.3
CCDC170-201ENST00000239374 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.3
CCDC170-201ENST00000239374 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 CBX1P83916 185 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 MCM5P33992 734 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC170-201ENST00000239374 MCM10Q7L590 875 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
CCDC170-201ENST00000239374 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
CCDC170-201ENST00000239374 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
CCDC170-201ENST00000239374 SDSP20132 328 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
CCDC170-201ENST00000239374 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
CCDC170-201ENST00000239374 MX1P20591 662 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 F6X3S4 739 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 ZKSCAN5Q9Y2L8 839 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 DYNC1I1O14576 645 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 PDCP20941 246 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 NSD2O96028 1365 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 NPHP1O15259 732 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
CCDC170-201ENST00000239374 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
CCDC170-201ENST00000239374 TXNDC2Q86VQ3 553 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 ZGPATQ8N5A5 531 aaKnown RBP13.18□□□□□ -0.3
CCDC170-201ENST00000239374 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
CCDC170-201ENST00000239374 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 SRCIN1Q9C0H9 1055 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 KRT85P78386 507 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 CCDC183Q5T5S1 534 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
CCDC170-201ENST00000239374 ZNF830Q96NB3 372 aaPredicted RBP13.18□□□□□ -0.3
CCDC170-201ENST00000239374 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
CCDC170-201ENST00000239374 BCORL1Q5H9F3 1711 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 PSMA5P28066 241 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
CCDC170-201ENST00000239374 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
CCDC170-201ENST00000239374 DISP1Q96F81 1524 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 FYB1O15117 783 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
CCDC170-201ENST00000239374 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
CCDC170-201ENST00000239374 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
CCDC170-201ENST00000239374 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 ADCY5O95622 1261 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 NME9Q86XW9 330 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
CCDC170-201ENST00000239374 STK3Q13188 491 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms