RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 TIE1P35590 1138 aa12.68□□□□□ -0.38
MDH1-201ENST00000233114 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.68□□□□□ -0.38
MDH1-201ENST00000233114 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
MDH1-201ENST00000233114 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
MDH1-201ENST00000233114 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
MDH1-201ENST00000233114 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
MDH1-201ENST00000233114 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
MDH1-201ENST00000233114 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
MDH1-201ENST00000233114 NRXN3Q9Y4C0 1643 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 TECPR2O15040 1411 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 FAM135BQ49AJ0 1406 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 TSPOAP1O95153 1857 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
MDH1-201ENST00000233114 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
MDH1-201ENST00000233114 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
MDH1-201ENST00000233114 EDC4Q6P2E9 1401 aaKnown RBP12.65□□□□□ -0.38
MDH1-201ENST00000233114 PANK1Q8TE04 598 aa12.65□□□□□ -0.38
MDH1-201ENST00000233114 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
MDH1-201ENST00000233114 CPS1P31327 1500 aa12.65□□□□□ -0.39
MDH1-201ENST00000233114 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
MDH1-201ENST00000233114 IGHDP01880 384 aa12.64□□□□□ -0.39
MDH1-201ENST00000233114 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
MDH1-201ENST00000233114 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
MDH1-201ENST00000233114 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
MDH1-201ENST00000233114 FCHSD2O94868 740 aa12.64□□□□□ -0.39
MDH1-201ENST00000233114 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
MDH1-201ENST00000233114 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
MDH1-201ENST00000233114 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
MDH1-201ENST00000233114 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
MDH1-201ENST00000233114 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
MDH1-201ENST00000233114 NBR1Q14596 966 aa12.63□□□□□ -0.39
MDH1-201ENST00000233114 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
MDH1-201ENST00000233114 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
MDH1-201ENST00000233114 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
MDH1-201ENST00000233114 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
MDH1-201ENST00000233114 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
MDH1-201ENST00000233114 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
MDH1-201ENST00000233114 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
MDH1-201ENST00000233114 RGS3P49796 1198 aa12.62□□□□□ -0.39
MDH1-201ENST00000233114 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
MDH1-201ENST00000233114 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
MDH1-201ENST00000233114 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
MDH1-201ENST00000233114 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
MDH1-201ENST00000233114 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
MDH1-201ENST00000233114 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
MDH1-201ENST00000233114 NEFMP07197 916 aa12.61□□□□□ -0.39
MDH1-201ENST00000233114 CALD1Q05682 793 aaKnown RBP12.61□□□□□ -0.39
MDH1-201ENST00000233114 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
MDH1-201ENST00000233114 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
MDH1-201ENST00000233114 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
MDH1-201ENST00000233114 RLBP1P12271 317 aa12.6□□□□□ -0.39
MDH1-201ENST00000233114 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
MDH1-201ENST00000233114 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
MDH1-201ENST00000233114 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
MDH1-201ENST00000233114 KIF13AQ9H1H9 1805 aa12.59□□□□□ -0.39
MDH1-201ENST00000233114 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
MDH1-201ENST00000233114 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
MDH1-201ENST00000233114 FTSJ3Q8IY81 847 aaKnown RBP12.59□□□□□ -0.39
MDH1-201ENST00000233114 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
MDH1-201ENST00000233114 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
MDH1-201ENST00000233114 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
MDH1-201ENST00000233114 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
MDH1-201ENST00000233114 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
MDH1-201ENST00000233114 SEC24BO95487 1268 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 RIPK4P57078 832 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
MDH1-201ENST00000233114 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 C3P01024 1663 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 TNRQ92752 1358 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 ATF7IPQ6VMQ6 1270 aa12.57□□□□□ -0.4
MDH1-201ENST00000233114 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
MDH1-201ENST00000233114 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
MDH1-201ENST00000233114 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
MDH1-201ENST00000233114 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
MDH1-201ENST00000233114 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
MDH1-201ENST00000233114 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
MDH1-201ENST00000233114 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
MDH1-201ENST00000233114 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
MDH1-201ENST00000233114 METP08581 1390 aa12.56□□□□□ -0.4
MDH1-201ENST00000233114 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
MDH1-201ENST00000233114 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
MDH1-201ENST00000233114 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
MDH1-201ENST00000233114 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
MDH1-201ENST00000233114 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
MDH1-201ENST00000233114 TRIM27P14373 513 aa12.54□□□□□ -0.4
MDH1-201ENST00000233114 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
MDH1-201ENST00000233114 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
MDH1-201ENST00000233114 TOPAZ1Q8N9V7 1692 aa12.54□□□□□ -0.4
MDH1-201ENST00000233114 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
MDH1-201ENST00000233114 USP19O94966 1318 aa12.54□□□□□ -0.4
MDH1-201ENST00000233114 LAS1LQ9Y4W2 734 aaKnown RBP12.54□□□□□ -0.4
MDH1-201ENST00000233114 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 NUBP1P53384 320 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 BECN1Q14457 450 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms