RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
NFKB1-201ENST00000226574 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
NFKB1-201ENST00000226574 MBIPQ9NS73 344 aa16.54■□□□□ 0.24
NFKB1-201ENST00000226574 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
NFKB1-201ENST00000226574 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
NFKB1-201ENST00000226574 CAMK4Q16566 473 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 FYB1O15117 783 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 PPFIA3O75145 1194 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 RRP9O43818 475 aaKnown RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
NFKB1-201ENST00000226574 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
NFKB1-201ENST00000226574 SDF4Q9BRK5 362 aa16.52■□□□□ 0.24
NFKB1-201ENST00000226574 NOS1P29475 1434 aa16.52■□□□□ 0.24
NFKB1-201ENST00000226574 NUCB1Q02818 461 aa16.52■□□□□ 0.24
NFKB1-201ENST00000226574 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
NFKB1-201ENST00000226574 APPP05067 770 aa16.52■□□□□ 0.23
NFKB1-201ENST00000226574 PSME1Q06323 249 aa16.52■□□□□ 0.23
NFKB1-201ENST00000226574 DNAJC2Q99543 621 aaKnown RBP16.52■□□□□ 0.23
NFKB1-201ENST00000226574 MEIS3Q99687 375 aa16.52■□□□□ 0.23
NFKB1-201ENST00000226574 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
NFKB1-201ENST00000226574 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
NFKB1-201ENST00000226574 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
NFKB1-201ENST00000226574 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
NFKB1-201ENST00000226574 ZGPATQ8N5A5 531 aaKnown RBP16.51■□□□□ 0.23
NFKB1-201ENST00000226574 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
NFKB1-201ENST00000226574 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
NFKB1-201ENST00000226574 JAKMIP1Q96N16 626 aaKnown RBP16.51■□□□□ 0.23
NFKB1-201ENST00000226574 TPM4P67936 248 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
NFKB1-201ENST00000226574 CPLX1O14810 134 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 CCDC83Q8IWF9 413 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
NFKB1-201ENST00000226574 SDSP20132 328 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 MCM2P49736 904 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
NFKB1-201ENST00000226574 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
NFKB1-201ENST00000226574 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
NFKB1-201ENST00000226574 WDR33Q9C0J8 1336 aaKnown RBP16.49■□□□□ 0.23
NFKB1-201ENST00000226574 ANXA1P04083 346 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 USHBP1Q8N6Y0 703 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 ATP10BO94823 1461 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 CLCN1P35523 988 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
NFKB1-201ENST00000226574 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
NFKB1-201ENST00000226574 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
NFKB1-201ENST00000226574 DDX11Q96FC9 970 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 ZMYND15Q9H091 742 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 KDM6BO15054 1643 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 MX1P20591 662 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
NFKB1-201ENST00000226574 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 RTEL1-TNFRSF6BF6WH68 1400 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
NFKB1-201ENST00000226574 FILIP1Q7Z7B0 1213 aa16.48■□□□□ 0.23
NFKB1-201ENST00000226574 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
NFKB1-201ENST00000226574 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
NFKB1-201ENST00000226574 TNNT3P45378 269 aaPredicted RBP16.47■□□□□ 0.23
NFKB1-201ENST00000226574 CCDC73Q6ZRK6 1079 aa16.47■□□□□ 0.23
NFKB1-201ENST00000226574 AEBP1Q8IUX7 1158 aa16.47■□□□□ 0.23
NFKB1-201ENST00000226574 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
NFKB1-201ENST00000226574 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
NFKB1-201ENST00000226574 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
NFKB1-201ENST00000226574 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
NFKB1-201ENST00000226574 LRRFIP2Q9Y608 721 aaKnown RBP16.47■□□□□ 0.23
NFKB1-201ENST00000226574 ZSCAN23Q3MJ62 389 aa16.46■□□□□ 0.23
NFKB1-201ENST00000226574 CHAMP1Q96JM3 812 aa16.46■□□□□ 0.23
NFKB1-201ENST00000226574 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
NFKB1-201ENST00000226574 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
NFKB1-201ENST00000226574 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
NFKB1-201ENST00000226574 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
NFKB1-201ENST00000226574 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 RASSF8Q8NHQ8 419 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 MYL6BP14649 208 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 CBX1P83916 185 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
NFKB1-201ENST00000226574 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
NFKB1-201ENST00000226574 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
NFKB1-201ENST00000226574 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
NFKB1-201ENST00000226574 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
NFKB1-201ENST00000226574 AACSQ86V21 672 aa16.44■□□□□ 0.22
NFKB1-201ENST00000226574 HCLS1P14317 486 aaPredicted RBP16.44■□□□□ 0.22
NFKB1-201ENST00000226574 TNMDQ9H2S6 317 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms