RNA–Protein interactions for RNA: ENST00000222482.8

CPA4-201, Transcript of carboxypeptidase A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA4, Length 2,797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-201ENST00000222482 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
CPA4-201ENST00000222482 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
CPA4-201ENST00000222482 FYB1O15117 783 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
CPA4-201ENST00000222482 NUCB1Q02818 461 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 CHD1LQ86WJ1 897 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPA4-201ENST00000222482 ARHGEF28Q8N1W1 1705 aaKnown RBP10.57□□□□□ -0.72
CPA4-201ENST00000222482 NEURL4Q96JN8 1562 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 ZMYM3Q14202 1370 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
CPA4-201ENST00000222482 USP32Q8NFA0 1604 aa10.56□□□□□ -0.72
CPA4-201ENST00000222482 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
CPA4-201ENST00000222482 KIF2CQ99661 725 aa10.56□□□□□ -0.72
CPA4-201ENST00000222482 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
CPA4-201ENST00000222482 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
CPA4-201ENST00000222482 SSFA2P28290 1259 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 DDIT3P35638 169 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 MRE11P49959 708 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 PRAM1Q96QH2 718 aa10.55□□□□□ -0.72
CPA4-201ENST00000222482 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
CPA4-201ENST00000222482 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
CPA4-201ENST00000222482 DDX11L8A8MPP1 907 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 PPIP5K1Q6PFW1 1433 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 ABCC11Q96J66 1382 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
CPA4-201ENST00000222482 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 KIF16BQ96L93 1317 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CPA4-201ENST00000222482 NCOA3Q9Y6Q9 1424 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 APBB1O00213 710 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 CT47B1P0C2W7 299 aaPredicted RBP10.53□□□□□ -0.72
CPA4-201ENST00000222482 CLCN1P35523 988 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 CEP170BQ9Y4F5 1589 aaPredicted RBP10.53□□□□□ -0.72
CPA4-201ENST00000222482 IPO8O15397 1037 aaKnown RBP10.53□□□□□ -0.72
CPA4-201ENST00000222482 IDI1Q13907 227 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
CPA4-201ENST00000222482 NSD2O96028 1365 aa10.52□□□□□ -0.72
CPA4-201ENST00000222482 SOCS7O14512 581 aa10.52□□□□□ -0.73
CPA4-201ENST00000222482 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.73
CPA4-201ENST00000222482 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
CPA4-201ENST00000222482 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
CPA4-201ENST00000222482 LRRC7Q96NW7 1537 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 ESPNB1AK53 854 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
CPA4-201ENST00000222482 DCTN1Q14203 1278 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 C16orf71Q8IYS4 520 aaPredicted RBP10.51□□□□□ -0.73
CPA4-201ENST00000222482 LMTK2Q8IWU2 1503 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 MYO5BQ9ULV0 1848 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 SNX21Q969T3 373 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 CHAMP1Q96JM3 812 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 NEXMIFQ5QGS0 1516 aa10.51□□□□□ -0.73
CPA4-201ENST00000222482 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 FGD1P98174 961 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 BMP2KLQ5H9B9 411 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
CPA4-201ENST00000222482 GBP4Q96PP9 640 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 K7ELQ4 463 aaPredicted RBP10.5□□□□□ -0.73
CPA4-201ENST00000222482 VAMP4O75379 141 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
CPA4-201ENST00000222482 PKP1Q13835 747 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
CPA4-201ENST00000222482 OTUD7AQ8TE49 926 aaPredicted RBP10.5□□□□□ -0.73
CPA4-201ENST00000222482 ABCC3O15438 1527 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 A2ML1A8K2U0 1454 aa10.5□□□□□ -0.73
CPA4-201ENST00000222482 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
CPA4-201ENST00000222482 HSP90AA2PQ14568 343 aaPredicted RBP10.49□□□□□ -0.73
CPA4-201ENST00000222482 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 CDK19Q9BWU1 502 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 TERF2IPQ9NYB0 399 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 IL16Q14005 1332 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 RPGRIP1LQ68CZ1 1315 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 RRP9O43818 475 aaKnown RBP10.49□□□□□ -0.73
CPA4-201ENST00000222482 PDE4CQ08493 712 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 KRT24Q2M2I5 525 aa10.49□□□□□ -0.73
CPA4-201ENST00000222482 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 WAPLQ7Z5K2 1190 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 C8orf58Q8NAV2 365 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 NCKAP5LQ9HCH0 1330 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 ARID3AQ99856 593 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 POLKQ9UBT6 870 aa10.48□□□□□ -0.73
CPA4-201ENST00000222482 SMARCA5O60264 1052 aaPredicted RBP10.48□□□□□ -0.73
CPA4-201ENST00000222482 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
CPA4-201ENST00000222482 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
CPA4-201ENST00000222482 MCTP1Q6DN14 999 aa10.47□□□□□ -0.73
CPA4-201ENST00000222482 HDGFL2Q7Z4V5 671 aaPredicted RBP10.47□□□□□ -0.73
CPA4-201ENST00000222482 DDX49Q9Y6V7 483 aaKnown RBP10.47□□□□□ -0.73
CPA4-201ENST00000222482 RRS1Q15050 365 aaKnown RBP10.47□□□□□ -0.73
CPA4-201ENST00000222482 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
CPA4-201ENST00000222482 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CPA4-201ENST00000222482 FCHSD2O94868 740 aa10.46□□□□□ -0.73
CPA4-201ENST00000222482 NFE2L2Q16236 605 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms