RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RGPD1P0DJD0 1748 aa22.72■■□□□ 1.23
GCDH-201ENST00000222214 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
GCDH-201ENST00000222214 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
GCDH-201ENST00000222214 FLT4P35916 1363 aa22.71■■□□□ 1.23
GCDH-201ENST00000222214 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
GCDH-201ENST00000222214 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.23
GCDH-201ENST00000222214 PHF8Q9UPP1 1060 aa22.69■■□□□ 1.22
GCDH-201ENST00000222214 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
GCDH-201ENST00000222214 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
GCDH-201ENST00000222214 DLG5Q8TDM6 1919 aa22.68■■□□□ 1.22
GCDH-201ENST00000222214 GNAI1P63096 354 aa22.68■■□□□ 1.22
GCDH-201ENST00000222214 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
GCDH-201ENST00000222214 ZKSCAN2Q63HK3 967 aa22.67■■□□□ 1.22
GCDH-201ENST00000222214 NLRP6P59044 892 aa22.66■■□□□ 1.22
GCDH-201ENST00000222214 ALDH1L2Q3SY69 923 aa22.66■■□□□ 1.22
GCDH-201ENST00000222214 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
GCDH-201ENST00000222214 HSP90AB2PQ58FF8 381 aa22.65■■□□□ 1.22
GCDH-201ENST00000222214 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
GCDH-201ENST00000222214 PANK1Q8TE04 598 aa22.65■■□□□ 1.22
GCDH-201ENST00000222214 SMC4Q9NTJ3 1288 aa22.65■■□□□ 1.22
GCDH-201ENST00000222214 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
GCDH-201ENST00000222214 MARF1Q9Y4F3 1742 aaKnown RBP22.65■■□□□ 1.22
GCDH-201ENST00000222214 KIF16BQ96L93 1317 aa22.64■■□□□ 1.21
GCDH-201ENST00000222214 BCL2L13Q9BXK5 485 aa22.63■■□□□ 1.21
GCDH-201ENST00000222214 ZNF853P0CG23 659 aa22.63■■□□□ 1.21
GCDH-201ENST00000222214 AMPHP49418 695 aa22.63■■□□□ 1.21
GCDH-201ENST00000222214 BRPF1P55201 1214 aaPredicted RBP22.62■■□□□ 1.21
GCDH-201ENST00000222214 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
GCDH-201ENST00000222214 IPO8O15397 1037 aaKnown RBP22.61■■□□□ 1.21
GCDH-201ENST00000222214 SSH1Q8WYL5 1049 aa22.61■■□□□ 1.21
GCDH-201ENST00000222214 CFAP44Q96MT7 982 aa22.61■■□□□ 1.21
GCDH-201ENST00000222214 DZIP1LQ8IYY4 767 aaKnown RBP22.61■■□□□ 1.21
GCDH-201ENST00000222214 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
GCDH-201ENST00000222214 KDRP35968 1356 aa22.6■■□□□ 1.21
GCDH-201ENST00000222214 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
GCDH-201ENST00000222214 SOX12O15370 315 aa22.59■■□□□ 1.21
GCDH-201ENST00000222214 MVPQ14764 893 aaKnown RBP22.59■■□□□ 1.21
GCDH-201ENST00000222214 C14orf37Q86TY3 774 aa22.59■■□□□ 1.21
GCDH-201ENST00000222214 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
GCDH-201ENST00000222214 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
GCDH-201ENST00000222214 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
GCDH-201ENST00000222214 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.2
GCDH-201ENST00000222214 RLBP1P12271 317 aa22.58■■□□□ 1.2
GCDH-201ENST00000222214 ATF7IPQ6VMQ6 1270 aa22.58■■□□□ 1.2
GCDH-201ENST00000222214 ESCO1Q5FWF5 840 aa22.57■■□□□ 1.2
GCDH-201ENST00000222214 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
GCDH-201ENST00000222214 PSME1Q06323 249 aa22.56■■□□□ 1.2
GCDH-201ENST00000222214 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
GCDH-201ENST00000222214 HOXC9P31274 260 aa22.55■■□□□ 1.2
GCDH-201ENST00000222214 THUMPD2Q9BTF0 503 aaKnown RBP22.55■■□□□ 1.2
GCDH-201ENST00000222214 TRIM27P14373 513 aa22.54■■□□□ 1.2
GCDH-201ENST00000222214 DDX19BQ9UMR2 479 aa22.54■■□□□ 1.2
GCDH-201ENST00000222214 KIF1AQ12756 1690 aa22.54■■□□□ 1.2
GCDH-201ENST00000222214 KCNH5Q8NCM2 988 aa22.54■■□□□ 1.2
GCDH-201ENST00000222214 VAMP4O75379 141 aa22.53■■□□□ 1.2
GCDH-201ENST00000222214 PROSER2Q86WR7 435 aaPredicted RBP22.53■■□□□ 1.2
GCDH-201ENST00000222214 NOB1Q9ULX3 412 aaKnown RBP22.53■■□□□ 1.2
GCDH-201ENST00000222214 NCOA3Q9Y6Q9 1424 aa22.53■■□□□ 1.2
GCDH-201ENST00000222214 ARHGAP45Q92619 1136 aa22.52■■□□□ 1.2
GCDH-201ENST00000222214 RBM33Q96EV2 1170 aaKnown RBP22.52■■□□□ 1.2
GCDH-201ENST00000222214 PDE4AP27815 886 aa22.52■■□□□ 1.2
GCDH-201ENST00000222214 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
GCDH-201ENST00000222214 EYA1Q99502 592 aa22.52■■□□□ 1.2
GCDH-201ENST00000222214 PHRF1Q9P1Y6 1649 aaKnown RBP22.52■■□□□ 1.19
GCDH-201ENST00000222214 BACH2Q9BYV9 841 aa22.51■■□□□ 1.19
GCDH-201ENST00000222214 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
GCDH-201ENST00000222214 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
GCDH-201ENST00000222214 LTN1O94822 1766 aa22.51■■□□□ 1.19
GCDH-201ENST00000222214 NFAT5O94916 1531 aa22.51■■□□□ 1.19
GCDH-201ENST00000222214 FAM83GA6ND36 823 aa22.5■■□□□ 1.19
GCDH-201ENST00000222214 IGHDP01880 384 aa22.5■■□□□ 1.19
GCDH-201ENST00000222214 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
GCDH-201ENST00000222214 NUTM2GQ5VZR2 741 aa22.5■■□□□ 1.19
GCDH-201ENST00000222214 HTATSF1O43719 755 aaKnown RBP22.49■■□□□ 1.19
GCDH-201ENST00000222214 CHMP4BQ9H444 224 aaKnown RBP22.49■■□□□ 1.19
GCDH-201ENST00000222214 RWDD1Q9H446 243 aaPredicted RBP22.49■■□□□ 1.19
GCDH-201ENST00000222214 DCCP43146 1447 aa22.49■■□□□ 1.19
GCDH-201ENST00000222214 CHL1O00533 1208 aa22.48■■□□□ 1.19
GCDH-201ENST00000222214 KIAA0232Q92628 1395 aa22.48■■□□□ 1.19
GCDH-201ENST00000222214 RTF1Q92541 710 aaKnown RBP22.47■■□□□ 1.19
GCDH-201ENST00000222214 IP6K1Q92551 441 aa22.47■■□□□ 1.19
GCDH-201ENST00000222214 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
GCDH-201ENST00000222214 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
GCDH-201ENST00000222214 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
GCDH-201ENST00000222214 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
GCDH-201ENST00000222214 ITPRIPQ8IWB1 547 aa22.46■■□□□ 1.19
GCDH-201ENST00000222214 SLIT3O75094 1523 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
GCDH-201ENST00000222214 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 PCDHB15Q9Y5E8 787 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 ORAI2Q96SN7 254 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 CRB1P82279 1406 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 MST1RQ04912 1400 aa22.45■■□□□ 1.18
GCDH-201ENST00000222214 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
GCDH-201ENST00000222214 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
GCDH-201ENST00000222214 MCM10Q7L590 875 aa22.43■■□□□ 1.18
GCDH-201ENST00000222214 TMEM57Q8N5G2 664 aa22.43■■□□□ 1.18
GCDH-201ENST00000222214 FOXO3O43524 673 aa22.42■■□□□ 1.18
GCDH-201ENST00000222214 LRRC37A3O60309 1634 aa22.41■■□□□ 1.18
GCDH-201ENST00000222214 HDAC1Q13547 482 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms