RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
RAB3D-201ENST00000222120 INSRP06213 1382 aa16.68■□□□□ 0.26
RAB3D-201ENST00000222120 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
RAB3D-201ENST00000222120 SURF6O75683 361 aaKnown RBP16.67■□□□□ 0.26
RAB3D-201ENST00000222120 C1orf141Q5JVX7 400 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
RAB3D-201ENST00000222120 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 YEATS2Q9ULM3 1422 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
RAB3D-201ENST00000222120 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
RAB3D-201ENST00000222120 NEK4P51957 841 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 HDAC1Q13547 482 aaPredicted RBP16.67■□□□□ 0.26
RAB3D-201ENST00000222120 TSHZ3Q63HK5 1081 aa16.67■□□□□ 0.26
RAB3D-201ENST00000222120 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
RAB3D-201ENST00000222120 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
RAB3D-201ENST00000222120 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
RAB3D-201ENST00000222120 IL16Q14005 1332 aa16.66■□□□□ 0.26
RAB3D-201ENST00000222120 FOXO3O43524 673 aa16.66■□□□□ 0.26
RAB3D-201ENST00000222120 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
RAB3D-201ENST00000222120 POGZQ7Z3K3 1410 aa16.66■□□□□ 0.26
RAB3D-201ENST00000222120 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
RAB3D-201ENST00000222120 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
RAB3D-201ENST00000222120 GNAI2P04899 355 aa16.65■□□□□ 0.26
RAB3D-201ENST00000222120 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
RAB3D-201ENST00000222120 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
RAB3D-201ENST00000222120 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
RAB3D-201ENST00000222120 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
RAB3D-201ENST00000222120 NUCB1Q02818 461 aa16.64■□□□□ 0.25
RAB3D-201ENST00000222120 MSNP26038 577 aaKnown RBP16.64■□□□□ 0.25
RAB3D-201ENST00000222120 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
RAB3D-201ENST00000222120 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
RAB3D-201ENST00000222120 UNC13BO14795 1591 aa16.64■□□□□ 0.25
RAB3D-201ENST00000222120 MEIS3Q99687 375 aa16.63■□□□□ 0.25
RAB3D-201ENST00000222120 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
RAB3D-201ENST00000222120 PLXNC1O60486 1568 aa16.63■□□□□ 0.25
RAB3D-201ENST00000222120 K7ELQ4 463 aaPredicted RBP16.63■□□□□ 0.25
RAB3D-201ENST00000222120 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
RAB3D-201ENST00000222120 THEMISQ8N1K5 641 aaPredicted RBP16.62■□□□□ 0.25
RAB3D-201ENST00000222120 GNAI3P08754 354 aa16.62■□□□□ 0.25
RAB3D-201ENST00000222120 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
RAB3D-201ENST00000222120 SMC5Q8IY18 1101 aa16.61■□□□□ 0.25
RAB3D-201ENST00000222120 SYNMO15061 1565 aa16.61■□□□□ 0.25
RAB3D-201ENST00000222120 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
RAB3D-201ENST00000222120 DIAPH3Q9NSV4 1193 aa16.6■□□□□ 0.25
RAB3D-201ENST00000222120 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
RAB3D-201ENST00000222120 PTMSP20962 102 aa16.6■□□□□ 0.25
RAB3D-201ENST00000222120 BMP2KLQ5H9B9 411 aa16.6■□□□□ 0.25
RAB3D-201ENST00000222120 NLRP2Q9NX02 1062 aa16.6■□□□□ 0.25
RAB3D-201ENST00000222120 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
RAB3D-201ENST00000222120 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
RAB3D-201ENST00000222120 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
RAB3D-201ENST00000222120 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
RAB3D-201ENST00000222120 IL13P35225 146 aa16.59■□□□□ 0.25
RAB3D-201ENST00000222120 RABEP1Q15276 862 aa16.59■□□□□ 0.25
RAB3D-201ENST00000222120 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
RAB3D-201ENST00000222120 ANXA1P04083 346 aa16.59■□□□□ 0.25
RAB3D-201ENST00000222120 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
RAB3D-201ENST00000222120 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
RAB3D-201ENST00000222120 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.25
RAB3D-201ENST00000222120 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
RAB3D-201ENST00000222120 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
RAB3D-201ENST00000222120 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
RAB3D-201ENST00000222120 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
RAB3D-201ENST00000222120 NUCB2P80303 420 aa16.57■□□□□ 0.24
RAB3D-201ENST00000222120 E9PCH4 1651 aa16.57■□□□□ 0.24
RAB3D-201ENST00000222120 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
RAB3D-201ENST00000222120 ERC2O15083 957 aa16.57■□□□□ 0.24
RAB3D-201ENST00000222120 UPF3BQ9BZI7 483 aaKnown RBP16.57■□□□□ 0.24
RAB3D-201ENST00000222120 SSFA2P28290 1259 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 TNPO1Q92973 898 aaKnown RBP16.56■□□□□ 0.24
RAB3D-201ENST00000222120 MYOM2P54296 1465 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 RNF214Q8ND24 703 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 ARID3AQ99856 593 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 CHMP4AQ9BY43 222 aa16.56■□□□□ 0.24
RAB3D-201ENST00000222120 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
RAB3D-201ENST00000222120 MRE11P49959 708 aa16.55■□□□□ 0.24
RAB3D-201ENST00000222120 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
RAB3D-201ENST00000222120 MADDQ8WXG6 1647 aa16.55■□□□□ 0.24
RAB3D-201ENST00000222120 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
RAB3D-201ENST00000222120 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
RAB3D-201ENST00000222120 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
RAB3D-201ENST00000222120 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
RAB3D-201ENST00000222120 FLIIQ13045 1269 aa16.54■□□□□ 0.24
RAB3D-201ENST00000222120 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
RAB3D-201ENST00000222120 TNRQ92752 1358 aa16.54■□□□□ 0.24
RAB3D-201ENST00000222120 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
RAB3D-201ENST00000222120 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 G2E3Q7L622 706 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 SIL1Q9H173 461 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 TET3O43151 1660 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
RAB3D-201ENST00000222120 RAPGEF4Q8WZA2 1011 aa16.53■□□□□ 0.24
RAB3D-201ENST00000222120 SDSP20132 328 aa16.52■□□□□ 0.24
RAB3D-201ENST00000222120 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms