RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 ATP7BP35670 1465 aa27.73■■■□□ 2.03
HTATSF1-201ENST00000218364 GZF1Q9H116 711 aaPredicted RBP27.71■■■□□ 2.03
HTATSF1-201ENST00000218364 KIF2CQ99661 725 aa27.7■■■□□ 2.02
HTATSF1-201ENST00000218364 ISY1Q9ULR0 285 aaKnown RBP27.7■■■□□ 2.02
HTATSF1-201ENST00000218364 DLC1Q96QB1 1528 aa27.69■■■□□ 2.02
HTATSF1-201ENST00000218364 MRE11P49959 708 aa27.69■■■□□ 2.02
HTATSF1-201ENST00000218364 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
HTATSF1-201ENST00000218364 IFT57Q9NWB7 429 aa27.69■■■□□ 2.02
HTATSF1-201ENST00000218364 ZNF853P0CG23 659 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 ANKRD45Q5TZF3 282 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 PHACTR3Q96KR7 559 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 ABCC4O15439 1325 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 REREQ9P2R6 1566 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 GNAI1P63096 354 aa27.68■■■□□ 2.02
HTATSF1-201ENST00000218364 PANK2Q9BZ23 570 aa27.65■■■□□ 2.02
HTATSF1-201ENST00000218364 TSPYL6Q8N831 410 aa27.65■■■□□ 2.02
HTATSF1-201ENST00000218364 TNPO1Q92973 898 aaKnown RBP27.65■■■□□ 2.02
HTATSF1-201ENST00000218364 PRKCSHP14314 528 aaPredicted RBP27.64■■■□□ 2.02
HTATSF1-201ENST00000218364 RAB3GAP1Q15042 981 aa27.64■■■□□ 2.02
HTATSF1-201ENST00000218364 SIRT2Q8IXJ6 389 aa27.64■■■□□ 2.02
HTATSF1-201ENST00000218364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.64■■■□□ 2.01
HTATSF1-201ENST00000218364 HSP90AB1P08238 724 aaKnown RBP27.63■■■□□ 2.01
HTATSF1-201ENST00000218364 IL13P35225 146 aa27.63■■■□□ 2.01
HTATSF1-201ENST00000218364 FBLN1P23142 703 aa27.62■■■□□ 2.01
HTATSF1-201ENST00000218364 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
HTATSF1-201ENST00000218364 HMOX1P09601 288 aa27.62■■■□□ 2.01
HTATSF1-201ENST00000218364 TBC1D9Q6ZT07 1266 aa27.62■■■□□ 2.01
HTATSF1-201ENST00000218364 MBIPQ9NS73 344 aa27.62■■■□□ 2.01
HTATSF1-201ENST00000218364 CDK12Q9NYV4 1490 aaPredicted RBP27.61■■■□□ 2.01
HTATSF1-201ENST00000218364 ARXQ96QS3 562 aa27.61■■■□□ 2.01
HTATSF1-201ENST00000218364 C1orf115Q9H7X2 142 aa27.61■■■□□ 2.01
HTATSF1-201ENST00000218364 GBP4Q96PP9 640 aa27.61■■■□□ 2.01
HTATSF1-201ENST00000218364 MAP2P11137 1827 aaKnown RBP27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 GRPEL1Q9HAV7 217 aa27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 KIF24Q5T7B8 1368 aa27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 CPSF1Q10570 1443 aaKnown RBP27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 PTMSP20962 102 aa27.6■■■□□ 2.01
HTATSF1-201ENST00000218364 AATKQ6ZMQ8 1374 aa27.59■■■□□ 2.01
HTATSF1-201ENST00000218364 EDC4Q6P2E9 1401 aaKnown RBP27.59■■■□□ 2.01
HTATSF1-201ENST00000218364 CFAP44Q96MT7 982 aa27.58■■■□□ 2.01
HTATSF1-201ENST00000218364 API5Q9BZZ5 524 aaKnown RBP27.58■■■□□ 2.01
HTATSF1-201ENST00000218364 K7ELQ4 463 aaPredicted RBP27.58■■■□□ 2.01
HTATSF1-201ENST00000218364 SKOR2Q2VWA4 1001 aaPredicted RBP27.58■■■□□ 2.01
HTATSF1-201ENST00000218364 TWISTNBQ3B726 338 aaPredicted RBP27.58■■■□□ 2.01
HTATSF1-201ENST00000218364 LMOD3Q0VAK6 560 aa27.57■■■□□ 2
HTATSF1-201ENST00000218364 EIF5BO60841 1220 aaKnown RBP27.57■■■□□ 2
HTATSF1-201ENST00000218364 EMILIN1Q9Y6C2 1016 aa27.57■■■□□ 2
HTATSF1-201ENST00000218364 CD2BP2O95400 341 aaKnown RBP27.56■■■□□ 2
HTATSF1-201ENST00000218364 CLCN1P35523 988 aa27.56■■■□□ 2
HTATSF1-201ENST00000218364 CDC45O75419 566 aa27.55■■■□□ 2
HTATSF1-201ENST00000218364 WAPLQ7Z5K2 1190 aa27.55■■■□□ 2
HTATSF1-201ENST00000218364 SETD1AO15047 1707 aaKnown RBP27.55■■■□□ 2
HTATSF1-201ENST00000218364 AGLP35573 1532 aa27.54■■■□□ 2
HTATSF1-201ENST00000218364 C8orf58Q8NAV2 365 aa27.54■■■□□ 2
HTATSF1-201ENST00000218364 ELL2O00472 640 aaPredicted RBP27.53■■■□□ 2
HTATSF1-201ENST00000218364 CLEC17AQ6ZS10 378 aa27.52■■■□□ 2
HTATSF1-201ENST00000218364 STAG3Q9UJ98 1225 aa27.52■■■□□ 2
HTATSF1-201ENST00000218364 RIMS2Q9UQ26 1411 aa27.51■■■□□ 2
HTATSF1-201ENST00000218364 MLECQ14165 292 aa27.51■■□□□ 1.99
HTATSF1-201ENST00000218364 A2ML1A8K2U0 1454 aa27.51■■□□□ 1.99
HTATSF1-201ENST00000218364 NME9Q86XW9 330 aa27.5■■□□□ 1.99
HTATSF1-201ENST00000218364 DCTPP1Q9H773 170 aa27.5■■□□□ 1.99
HTATSF1-201ENST00000218364 HSP90AA1P07900 732 aaKnown RBP27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 GSPT1P15170 499 aaKnown RBP27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 KNDC1Q76NI1 1749 aa27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 DLG5Q8TDM6 1919 aa27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 PLEKHM2Q8IWE5 1019 aa27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 RBM42Q9BTD8 480 aaKnown RBP27.49■■□□□ 1.99
HTATSF1-201ENST00000218364 WASLO00401 505 aaPredicted RBP27.48■■□□□ 1.99
HTATSF1-201ENST00000218364 INTS3Q68E01 1043 aaKnown RBP27.47■■□□□ 1.99
HTATSF1-201ENST00000218364 GAS2L2Q8NHY3 880 aa27.47■■□□□ 1.99
HTATSF1-201ENST00000218364 GAS2L3Q86XJ1 694 aa27.46■■□□□ 1.99
HTATSF1-201ENST00000218364 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.99
HTATSF1-201ENST00000218364 TTC22Q5TAA0 569 aa27.44■■□□□ 1.98
HTATSF1-201ENST00000218364 ZRANB1Q9UGI0 708 aa27.44■■□□□ 1.98
HTATSF1-201ENST00000218364 RABEP1Q15276 862 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 COG3Q96JB2 828 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 FOXD4L1Q9NU39 408 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 MON2Q7Z3U7 1717 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 SPATA31D1Q6ZQQ2 1576 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 CPS1P31327 1500 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 FAM83GA6ND36 823 aa27.43■■□□□ 1.98
HTATSF1-201ENST00000218364 SSFA2P28290 1259 aa27.42■■□□□ 1.98
HTATSF1-201ENST00000218364 ANKRD44Q8N8A2 993 aa27.42■■□□□ 1.98
HTATSF1-201ENST00000218364 ATP10DQ9P241 1426 aa27.42■■□□□ 1.98
HTATSF1-201ENST00000218364 RGS12O14924 1447 aa27.4■■□□□ 1.98
HTATSF1-201ENST00000218364 HAP1P54257 671 aaPredicted RBP27.4■■□□□ 1.98
HTATSF1-201ENST00000218364 RPAP2Q8IXW5 612 aaPredicted RBP27.4■■□□□ 1.98
HTATSF1-201ENST00000218364 IBTKQ9P2D0 1353 aaPredicted RBP27.39■■□□□ 1.98
HTATSF1-201ENST00000218364 NRKQ7Z2Y5 1582 aa27.39■■□□□ 1.98
HTATSF1-201ENST00000218364 GOLGA6L22H0YM25 854 aa27.39■■□□□ 1.98
HTATSF1-201ENST00000218364 NRXN3Q9Y4C0 1643 aa27.39■■□□□ 1.98
HTATSF1-201ENST00000218364 ESPNB1AK53 854 aa27.39■■□□□ 1.97
HTATSF1-201ENST00000218364 NUDT16Q96DE0 195 aaKnown RBP27.39■■□□□ 1.97
HTATSF1-201ENST00000218364 USP26Q9BXU7 913 aa27.39■■□□□ 1.97
HTATSF1-201ENST00000218364 C3P01024 1663 aa27.38■■□□□ 1.97
HTATSF1-201ENST00000218364 RRS1Q15050 365 aaKnown RBP27.38■■□□□ 1.97
HTATSF1-201ENST00000218364 DCTN1Q14203 1278 aa27.38■■□□□ 1.97
HTATSF1-201ENST00000218364 BAG4O95429 457 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms