RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 TTC5Q8N0Z6 440 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 KIAA1211Q6ZU35 1233 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 MAP3K19Q56UN5 1328 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 TRPM2O94759 1503 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 SIL1Q9H173 461 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 KAT6BQ8WYB5 2073 aa10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 NPHP1O15259 732 aa10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
CSNK2A1-201ENST00000217244 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 CCDC30Q5VVM6 783 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 C16orf71Q8IYS4 520 aaPredicted RBP10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 MEIS3Q99687 375 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
CSNK2A1-201ENST00000217244 EYA1Q99502 592 aa10.61□□□□□ -0.71
CSNK2A1-201ENST00000217244 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
CSNK2A1-201ENST00000217244 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
CSNK2A1-201ENST00000217244 VAMP4O75379 141 aa10.61□□□□□ -0.71
CSNK2A1-201ENST00000217244 BTBD11A6QL63 1104 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 NSD2O96028 1365 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 MCCP23508 829 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 PLEKHO1Q53GL0 409 aaPredicted RBP10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 MLH3Q9UHC1 1453 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 NEO1Q92859 1461 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 IL13P35225 146 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
CSNK2A1-201ENST00000217244 TOM1L2Q6ZVM7 507 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 G2E3Q7L622 706 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 PRR36Q9H6K5 1346 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 SLC39A6Q13433 755 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 TAF7LQ5H9L4 462 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 GNAI2P04899 355 aa10.59□□□□□ -0.71
CSNK2A1-201ENST00000217244 E9PCH4 1651 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 SRGAP3O43295 1099 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 PLXNC1O60486 1568 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 ZMYM4Q5VZL5 1548 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 TAF7Q15545 349 aaPredicted RBP10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 TRIM44Q96DX7 344 aaPredicted RBP10.58□□□□□ -0.72
CSNK2A1-201ENST00000217244 GSE1Q14687 1217 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 LRRFIP2Q9Y608 721 aaKnown RBP10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 ABCC3O15438 1527 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 ABCC11Q96J66 1382 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 ZNF521Q96K83 1311 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 CDC45O75419 566 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 NPC1L1Q9UHC9 1359 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 FLIIQ13045 1269 aa10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
CSNK2A1-201ENST00000217244 EFCAB6Q5THR3 1501 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 NUTM2BA6NNL0 878 aaPredicted RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 NUTM2EB1AL46 878 aaPredicted RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 NUTM2AQ8IVF1 878 aaPredicted RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 UNC13BO14795 1591 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 ROBO2Q9HCK4 1378 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 OTUD7AQ8TE49 926 aaPredicted RBP10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 TMEM2Q9UHN6 1383 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 DIAPH3Q9NSV4 1193 aa10.56□□□□□ -0.72
CSNK2A1-201ENST00000217244 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 HECW2Q9P2P5 1572 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 GNAI3P08754 354 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 NINLQ9Y2I6 1382 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 PI4KAP2A4QPH2 592 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 ST18O60284 1047 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 NEK4P51957 841 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 FOSBP53539 338 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 PI4KAP1Q8N8J0 262 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 GBP4Q96PP9 640 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 ANKRD24Q8TF21 1146 aa10.55□□□□□ -0.72
CSNK2A1-201ENST00000217244 DTNBO60941 627 aa10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 G3BP1Q13283 466 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■■■■□ 19.7
CSNK2A1-201ENST00000217244 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 PHAXQ9H814 394 aaKnown RBP10.54□□□□□ -0.72
CSNK2A1-201ENST00000217244 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms