RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 NUCB1Q02818 461 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 PTMSP20962 102 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
CSTF1-201ENST00000217109 FGD1P98174 961 aa11.98□□□□□ -0.49
CSTF1-201ENST00000217109 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
CSTF1-201ENST00000217109 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 NEK4P51957 841 aa11.97□□□□□ -0.49
CSTF1-201ENST00000217109 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 SMC5Q8IY18 1101 aa11.97□□□□□ -0.49
CSTF1-201ENST00000217109 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
CSTF1-201ENST00000217109 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
CSTF1-201ENST00000217109 SKOR2Q2VWA4 1001 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
CSTF1-201ENST00000217109 ACEP12821 1306 aa11.96□□□□□ -0.49
CSTF1-201ENST00000217109 POLR1AO95602 1720 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-201ENST00000217109 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-201ENST00000217109 GNAI2P04899 355 aa11.96□□□□□ -0.49
CSTF1-201ENST00000217109 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-201ENST00000217109 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.5
CSTF1-201ENST00000217109 BMP2KLQ5H9B9 411 aa11.96□□□□□ -0.5
CSTF1-201ENST00000217109 CCDC30Q5VVM6 783 aa11.96□□□□□ -0.5
CSTF1-201ENST00000217109 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.5
CSTF1-201ENST00000217109 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
CSTF1-201ENST00000217109 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
CSTF1-201ENST00000217109 USHBP1Q8N6Y0 703 aa11.95□□□□□ -0.5
CSTF1-201ENST00000217109 PPIP5K1Q6PFW1 1433 aa11.95□□□□□ -0.5
CSTF1-201ENST00000217109 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
CSTF1-201ENST00000217109 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
CSTF1-201ENST00000217109 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
CSTF1-201ENST00000217109 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 TSHZ3Q63HK5 1081 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
CSTF1-201ENST00000217109 GNAI3P08754 354 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
CSTF1-201ENST00000217109 RABEP1Q15276 862 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 MYOM2P54296 1465 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
CSTF1-201ENST00000217109 MRE11P49959 708 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 AIMP1Q12904 312 aaKnown RBP11.94□□□□□ -0.5
CSTF1-201ENST00000217109 MEIS3Q99687 375 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 NUCB2P80303 420 aa11.94□□□□□ -0.5
CSTF1-201ENST00000217109 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
CSTF1-201ENST00000217109 FOXO3O43524 673 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 E9PCH4 1651 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 CAVIN1Q6NZI2 390 aaKnown RBP11.93□□□□□ -0.5
CSTF1-201ENST00000217109 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
CSTF1-201ENST00000217109 XPCQ01831 940 aaPredicted RBP11.93□□□□□ -0.5
CSTF1-201ENST00000217109 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
CSTF1-201ENST00000217109 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
CSTF1-201ENST00000217109 ARHGAP45Q92619 1136 aa11.92□□□□□ -0.5
CSTF1-201ENST00000217109 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
CSTF1-201ENST00000217109 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
CSTF1-201ENST00000217109 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
CSTF1-201ENST00000217109 IL13P35225 146 aa11.92□□□□□ -0.5
CSTF1-201ENST00000217109 ERC2O15083 957 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 LRRCC1Q9C099 1032 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 SSFA2P28290 1259 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
CSTF1-201ENST00000217109 TET3O43151 1660 aa11.91□□□□□ -0.5
CSTF1-201ENST00000217109 GPATCH3Q96I76 525 aa11.9□□□□□ -0.5
CSTF1-201ENST00000217109 GRPEL1Q9HAV7 217 aa11.9□□□□□ -0.5
CSTF1-201ENST00000217109 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 GNAT3A8MTJ3 354 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 IFIT2P09913 472 aaKnown RBP11.89□□□□□ -0.51
CSTF1-201ENST00000217109 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
CSTF1-201ENST00000217109 NASPP49321 788 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-201ENST00000217109 GLIPR1L2Q4G1C9 344 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-201ENST00000217109 KIF1BO60333 1816 aa11.89□□□□□ -0.51
CSTF1-201ENST00000217109 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 SPHKAPQ2M3C7 1700 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-201ENST00000217109 PPP6R1Q9UPN7 881 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 SDSP20132 328 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 FLIIQ13045 1269 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-201ENST00000217109 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-201ENST00000217109 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
CSTF1-201ENST00000217109 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
CSTF1-201ENST00000217109 TTC22Q5TAA0 569 aa11.87□□□□□ -0.51
CSTF1-201ENST00000217109 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CSTF1-201ENST00000217109 LRRFIP2Q9Y608 721 aaKnown RBP11.87□□□□□ -0.51
CSTF1-201ENST00000217109 ANXA1P04083 346 aa11.87□□□□□ -0.51
CSTF1-201ENST00000217109 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
CSTF1-201ENST00000217109 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms