RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
RIPK3-201ENST00000216274 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
RIPK3-201ENST00000216274 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
RIPK3-201ENST00000216274 U2SURPO15042 1029 aaKnown RBP16.62■□□□□ 0.25
RIPK3-201ENST00000216274 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
RIPK3-201ENST00000216274 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
RIPK3-201ENST00000216274 MON2Q7Z3U7 1717 aa16.62■□□□□ 0.25
RIPK3-201ENST00000216274 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
RIPK3-201ENST00000216274 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
RIPK3-201ENST00000216274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.62■□□□□ 0.25
RIPK3-201ENST00000216274 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
RIPK3-201ENST00000216274 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-201ENST00000216274 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-201ENST00000216274 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-201ENST00000216274 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
RIPK3-201ENST00000216274 USP6P35125 1406 aa16.61■□□□□ 0.25
RIPK3-201ENST00000216274 ABCA3Q99758 1704 aa16.61■□□□□ 0.25
RIPK3-201ENST00000216274 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
RIPK3-201ENST00000216274 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
RIPK3-201ENST00000216274 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
RIPK3-201ENST00000216274 PDE3AQ14432 1141 aa16.58■□□□□ 0.25
RIPK3-201ENST00000216274 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.25
RIPK3-201ENST00000216274 BCAR3O75815 825 aa16.58■□□□□ 0.24
RIPK3-201ENST00000216274 MS4A1P11836 297 aa16.58■□□□□ 0.24
RIPK3-201ENST00000216274 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
RIPK3-201ENST00000216274 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
RIPK3-201ENST00000216274 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
RIPK3-201ENST00000216274 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
RIPK3-201ENST00000216274 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
RIPK3-201ENST00000216274 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
RIPK3-201ENST00000216274 CT47B1P0C2W7 299 aaPredicted RBP16.57■□□□□ 0.24
RIPK3-201ENST00000216274 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
RIPK3-201ENST00000216274 COG3Q96JB2 828 aa16.57■□□□□ 0.24
RIPK3-201ENST00000216274 IL16Q14005 1332 aa16.56■□□□□ 0.24
RIPK3-201ENST00000216274 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
RIPK3-201ENST00000216274 FCHSD2O94868 740 aa16.56■□□□□ 0.24
RIPK3-201ENST00000216274 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
RIPK3-201ENST00000216274 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
RIPK3-201ENST00000216274 NEFMP07197 916 aa16.55■□□□□ 0.24
RIPK3-201ENST00000216274 TTC21AQ8NDW8 1320 aa16.55■□□□□ 0.24
RIPK3-201ENST00000216274 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
RIPK3-201ENST00000216274 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
RIPK3-201ENST00000216274 NME9Q86XW9 330 aa16.55■□□□□ 0.24
RIPK3-201ENST00000216274 PHRF1Q9P1Y6 1649 aaKnown RBP16.54■□□□□ 0.24
RIPK3-201ENST00000216274 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
RIPK3-201ENST00000216274 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
RIPK3-201ENST00000216274 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
RIPK3-201ENST00000216274 AFF2P51816 1311 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
RIPK3-201ENST00000216274 MYT1Q01538 1121 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 USP19O94966 1318 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 AAMPQ13685 434 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
RIPK3-201ENST00000216274 PIK3C2AO00443 1686 aa16.52■□□□□ 0.24
RIPK3-201ENST00000216274 TTC21BQ7Z4L5 1316 aa16.52■□□□□ 0.24
RIPK3-201ENST00000216274 NGLY1Q96IV0 654 aa16.52■□□□□ 0.23
RIPK3-201ENST00000216274 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.23
RIPK3-201ENST00000216274 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.52■□□□□ 0.23
RIPK3-201ENST00000216274 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
RIPK3-201ENST00000216274 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 SLIT2O94813 1529 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 RIPK4P57078 832 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
RIPK3-201ENST00000216274 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
RIPK3-201ENST00000216274 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
RIPK3-201ENST00000216274 SLIT3O75094 1523 aa16.49■□□□□ 0.23
RIPK3-201ENST00000216274 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
RIPK3-201ENST00000216274 IL13P35225 146 aa16.49■□□□□ 0.23
RIPK3-201ENST00000216274 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
RIPK3-201ENST00000216274 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
RIPK3-201ENST00000216274 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
RIPK3-201ENST00000216274 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
RIPK3-201ENST00000216274 FRAT1Q92837 279 aaPredicted RBP16.47■□□□□ 0.23
RIPK3-201ENST00000216274 USP21Q9UK80 565 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 CPDO75976 1380 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 NLRP6P59044 892 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 ANP32EQ9BTT0 268 aa16.47■□□□□ 0.23
RIPK3-201ENST00000216274 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
RIPK3-201ENST00000216274 ILDR2Q71H61 639 aa16.46■□□□□ 0.23
RIPK3-201ENST00000216274 OVOS2A0A0J9YW53 1432 aa16.46■□□□□ 0.23
RIPK3-201ENST00000216274 ATRNO75882 1429 aa16.46■□□□□ 0.23
RIPK3-201ENST00000216274 OVOS2Q6IE36 1432 aa16.46■□□□□ 0.23
RIPK3-201ENST00000216274 FBLN1P23142 703 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 PDE4AP27815 886 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 CLUAP1Q96AJ1 413 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
RIPK3-201ENST00000216274 MSH5O43196 834 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 GCP02774 474 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
RIPK3-201ENST00000216274 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
RIPK3-201ENST00000216274 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
RIPK3-201ENST00000216274 FAM83GA6ND36 823 aa16.44■□□□□ 0.22
RIPK3-201ENST00000216274 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms