RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
ACTN1-201ENST00000193403 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-201ENST00000193403 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
ACTN1-201ENST00000193403 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
ACTN1-201ENST00000193403 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
ACTN1-201ENST00000193403 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
ACTN1-201ENST00000193403 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
ACTN1-201ENST00000193403 PTPRTO14522 1441 aa13.65□□□□□ -0.22
ACTN1-201ENST00000193403 KRT24Q2M2I5 525 aa13.65□□□□□ -0.23
ACTN1-201ENST00000193403 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.23
ACTN1-201ENST00000193403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-201ENST00000193403 A0A0G2JS52 829 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 CCDC39Q9UFE4 941 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-201ENST00000193403 SYNMO15061 1565 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 MAST1Q9Y2H9 1570 aa13.64□□□□□ -0.23
ACTN1-201ENST00000193403 FYB1O15117 783 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 OFD1O75665 1012 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
ACTN1-201ENST00000193403 HMMRO75330 724 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 TSC1Q92574 1164 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 C14orf93Q9H972 538 aaKnown RBP13.63□□□□□ -0.23
ACTN1-201ENST00000193403 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
ACTN1-201ENST00000193403 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-201ENST00000193403 KCNJ4P48050 445 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
ACTN1-201ENST00000193403 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 NAP1L2Q9ULW6 460 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-201ENST00000193403 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 ATP10AO60312 1499 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-201ENST00000193403 SDSP20132 328 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
ACTN1-201ENST00000193403 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
ACTN1-201ENST00000193403 FIBPO43427 364 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
ACTN1-201ENST00000193403 IDI1Q13907 227 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 CHAF1AQ13111 956 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-201ENST00000193403 PLEKHM2Q8IWE5 1019 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 USP25Q9UHP3 1055 aa13.61□□□□□ -0.23
ACTN1-201ENST00000193403 F6X3S4 739 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 FCHSD2O94868 740 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 SPC24Q8NBT2 197 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 ERC2O15083 957 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 VAMP4O75379 141 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
ACTN1-201ENST00000193403 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
ACTN1-201ENST00000193403 MCM10Q7L590 875 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
ACTN1-201ENST00000193403 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-201ENST00000193403 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 KIF2CQ99661 725 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
ACTN1-201ENST00000193403 YEATS2Q9ULM3 1422 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
ACTN1-201ENST00000193403 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.23
ACTN1-201ENST00000193403 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.23
ACTN1-201ENST00000193403 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.23
ACTN1-201ENST00000193403 MBD3O95983 291 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 COG3Q96JB2 828 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 MEIS3Q99687 375 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 CBX1P83916 185 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-201ENST00000193403 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
ACTN1-201ENST00000193403 PHF14O94880 888 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 NME9Q86XW9 330 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
ACTN1-201ENST00000193403 STK31Q9BXU1 1019 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-201ENST00000193403 GOLGA6L4A6NEF3 574 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-201ENST00000193403 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
ACTN1-201ENST00000193403 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-201ENST00000193403 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
ACTN1-201ENST00000193403 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
ACTN1-201ENST00000193403 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 PPIP5K1Q6PFW1 1433 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
ACTN1-201ENST00000193403 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms