RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PTCD1O75127 700 aaKnown RBP22.57■■□□□ 1.2
MBD3-201ENST00000156825 AACSQ86V21 672 aa22.57■■□□□ 1.2
MBD3-201ENST00000156825 NME9Q86XW9 330 aa22.57■■□□□ 1.2
MBD3-201ENST00000156825 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
MBD3-201ENST00000156825 FCHSD2O94868 740 aa22.57■■□□□ 1.2
MBD3-201ENST00000156825 RABEP1Q15276 862 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 SPG7Q9UQ90 795 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 SART3Q15020 963 aaKnown RBP22.56■■□□□ 1.2
MBD3-201ENST00000156825 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 ERC1Q8IUD2 1116 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 PDILTQ8N807 584 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
MBD3-201ENST00000156825 CEBPAP49715 358 aaPredicted RBP22.56■■□□□ 1.2
MBD3-201ENST00000156825 NFE2L2Q16236 605 aa22.55■■□□□ 1.2
MBD3-201ENST00000156825 ATP2B2Q01814 1243 aa22.55■■□□□ 1.2
MBD3-201ENST00000156825 SLFN5Q08AF3 891 aa22.55■■□□□ 1.2
MBD3-201ENST00000156825 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
MBD3-201ENST00000156825 CWC27Q6UX04 472 aaKnown RBP22.54■■□□□ 1.2
MBD3-201ENST00000156825 HECW1Q76N89 1606 aa22.54■■□□□ 1.2
MBD3-201ENST00000156825 NAP1L1P55209 391 aaKnown RBP22.54■■□□□ 1.2
MBD3-201ENST00000156825 BICDL1Q6ZP65 573 aa22.54■■□□□ 1.2
MBD3-201ENST00000156825 EMILIN1Q9Y6C2 1016 aa22.54■■□□□ 1.2
MBD3-201ENST00000156825 FAM43AQ8N2R8 423 aa22.54■■□□□ 1.2
MBD3-201ENST00000156825 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 BRMS1Q9HCU9 246 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 TTLL5Q6EMB2 1281 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 XBP1P17861 261 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 NUTM1Q86Y26 1132 aa22.53■■□□□ 1.2
MBD3-201ENST00000156825 MPHOSPH8Q99549 860 aa22.52■■□□□ 1.2
MBD3-201ENST00000156825 RSPH6AQ9H0K4 717 aa22.52■■□□□ 1.2
MBD3-201ENST00000156825 TRIM5Q9C035 493 aa22.52■■□□□ 1.2
MBD3-201ENST00000156825 CYP46A1Q9Y6A2 500 aa22.52■■□□□ 1.2
MBD3-201ENST00000156825 CWC22Q9HCG8 908 aaKnown RBP22.51■■□□□ 1.19
MBD3-201ENST00000156825 FOXO3O43524 673 aa22.51■■□□□ 1.19
MBD3-201ENST00000156825 KINO60870 393 aaKnown RBP22.51■■□□□ 1.19
MBD3-201ENST00000156825 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
MBD3-201ENST00000156825 SMARCA5O60264 1052 aaPredicted RBP22.5■■□□□ 1.19
MBD3-201ENST00000156825 HIP1O00291 1037 aa22.5■■□□□ 1.19
MBD3-201ENST00000156825 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
MBD3-201ENST00000156825 SSH1Q8WYL5 1049 aa22.5■■□□□ 1.19
MBD3-201ENST00000156825 OLFM4Q6UX06 510 aa22.5■■□□□ 1.19
MBD3-201ENST00000156825 MRE11P49959 708 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 STK38Q15208 465 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 GNAT3A8MTJ3 354 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 IDI1Q13907 227 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 BRPF3Q9ULD4 1205 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 F6X3S4 739 aa22.49■■□□□ 1.19
MBD3-201ENST00000156825 BRPF1P55201 1214 aaPredicted RBP22.48■■□□□ 1.19
MBD3-201ENST00000156825 CCDC70Q6NSX1 233 aa22.48■■□□□ 1.19
MBD3-201ENST00000156825 PDCP20941 246 aa22.48■■□□□ 1.19
MBD3-201ENST00000156825 NUP133Q8WUM0 1156 aa22.47■■□□□ 1.19
MBD3-201ENST00000156825 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
MBD3-201ENST00000156825 FBLN1P23142 703 aa22.47■■□□□ 1.19
MBD3-201ENST00000156825 CT47B1P0C2W7 299 aaPredicted RBP22.47■■□□□ 1.19
MBD3-201ENST00000156825 CEP126Q9P2H0 1117 aa22.47■■□□□ 1.19
MBD3-201ENST00000156825 R3HCC1Q9Y3T6 440 aaKnown RBP22.47■■□□□ 1.19
MBD3-201ENST00000156825 MCM2P49736 904 aa22.46■■□□□ 1.19
MBD3-201ENST00000156825 SMC2O95347 1197 aa22.46■■□□□ 1.19
MBD3-201ENST00000156825 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
MBD3-201ENST00000156825 SPC24Q8NBT2 197 aa22.45■■□□□ 1.19
MBD3-201ENST00000156825 K7ELQ4 463 aaPredicted RBP22.45■■□□□ 1.18
MBD3-201ENST00000156825 JAKMIP1Q96N16 626 aaKnown RBP22.45■■□□□ 1.18
MBD3-201ENST00000156825 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.45■■□□□ 1.183e-6■■■■■ 28.4
MBD3-201ENST00000156825 ABCC5O15440 1437 aa22.45■■□□□ 1.18
MBD3-201ENST00000156825 OFD1O75665 1012 aa22.45■■□□□ 1.18
MBD3-201ENST00000156825 NAT10Q9H0A0 1025 aaKnown RBP22.45■■□□□ 1.18
MBD3-201ENST00000156825 GNL3LQ9NVN8 582 aaKnown RBP22.44■■□□□ 1.18
MBD3-201ENST00000156825 MPRIPQ6WCQ1 1025 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 PIBF1Q8WXW3 757 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 MBD3O95983 291 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 CD109Q6YHK3 1445 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 FBXO3Q9UK99 471 aa22.44■■□□□ 1.18
MBD3-201ENST00000156825 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
MBD3-201ENST00000156825 IDH1O75874 414 aaKnown RBP22.43■■□□□ 1.18
MBD3-201ENST00000156825 LARP1BQ659C4 914 aaKnown RBP22.43■■□□□ 1.18
MBD3-201ENST00000156825 MNS1Q8NEH6 495 aa22.43■■□□□ 1.18
MBD3-201ENST00000156825 ME1P48163 572 aa22.42■■□□□ 1.18
MBD3-201ENST00000156825 RARSP54136 660 aaKnown RBP22.42■■□□□ 1.18
MBD3-201ENST00000156825 BLOC1S2Q6QNY1 142 aa22.42■■□□□ 1.18
MBD3-201ENST00000156825 UPF3BQ9BZI7 483 aaKnown RBP22.42■■□□□ 1.18
MBD3-201ENST00000156825 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
MBD3-201ENST00000156825 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 EPS15P42566 896 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
MBD3-201ENST00000156825 TSPY26PQ9H489 355 aa22.41■■□□□ 1.18
MBD3-201ENST00000156825 RPAP2Q8IXW5 612 aaPredicted RBP22.41■■□□□ 1.18
MBD3-201ENST00000156825 GPS2Q13227 327 aa22.4■■□□□ 1.18
MBD3-201ENST00000156825 CT47A1Q5JQC4 288 aaPredicted RBP22.4■■□□□ 1.18
MBD3-201ENST00000156825 ABCF2Q9UG63 623 aa22.4■■□□□ 1.18
MBD3-201ENST00000156825 PATL2C9JE40 543 aaKnown RBP22.4■■□□□ 1.18
MBD3-201ENST00000156825 NACAP1Q9BZK3 213 aa22.4■■□□□ 1.18
MBD3-201ENST00000156825 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.4■■□□□ 1.18
MBD3-201ENST00000156825 DDX11Q96FC9 970 aa22.39■■□□□ 1.18
MBD3-201ENST00000156825 RBM5P52756 815 aaKnown RBP eCLIP22.39■■□□□ 1.173e-6■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms