RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 DAPK3O43293 454 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 TUSC2O75896 110 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 LATS1O95835 1130 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 APOC2P02655 101 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ERCC2P18074 760 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 TACR2P21452 398 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 SLC6A4P31645 630 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 SCAND1P57086 179 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 GUCY1A3Q02108 690 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 CYP1B1Q16678 543 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 NCBP2-AS2Q69YL0 99 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 CES5AQ6NT32 575 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 RWDD4Q6NW29 188 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 FBXL22Q6P050 247 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 DARS2Q6PI48 645 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 POMZP3Q6PJE2 187 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 HTR3DQ70Z44 454 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 CHSY1Q86X52 802 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ARID3BQ8IVW6 561 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 MICALL1Q8N3F8 863 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 NOA1Q8NC60 698 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 SH3RF2Q8TEC5 729 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ATG4AQ8WYN0 398 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 FGF13Q92913 245 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 HAUS1Q96CS2 278 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PABPC5Q96DU9 382 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 RCC1LQ96I51 464 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 MSLNLQ96KJ4 702 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 SAE1Q9UBE0 346 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PPARGC1AQ9UBK2 798 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 TBK1Q9UHD2 729 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 MFHAS1Q9Y4C4 1052 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 F5H5T6 163 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 RGS13O14921 159 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 FGF10O15520 208 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 EFSO43281 561 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PHF2O75151 1096 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 TPPPO94811 219 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PECAM1P16284 738 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ZFXP17010 805 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 TGM2P21980 687 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 RAD52P43351 418 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 GPR3P46089 330 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 PRIM2P49643 509 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 IRAK1P51617 712 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 EMP3P54852 163 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 OTUD4Q01804 1114 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 GBE1Q04446 702 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ACAP2Q15057 778 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 CCNG2Q16589 344 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 BROXQ5VW32 411 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 SLC6A19Q695T7 634 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 RFWD3Q6PCD5 774 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 NPNTQ6UXI9 565 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 LRRC31Q6UY01 552 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 GALNT5Q7Z7M9 940 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ZSCAN18Q8TBC5 510 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 ACTL9Q8TC94 416 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 C1orf54Q8WWF1 131 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 HDAC2Q92769 488 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 P3H4Q92791 437 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 IGSF8Q969P0 613 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 MAGOHBQ96A72 148 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 MYEOVQ96EZ4 313 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 C1orf159Q96HA4 380 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 FAM118BQ9BPY3 351 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 DDX47Q9H0S4 455 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 POLMQ9NP87 494 aaPredicted RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 HOMER3Q9NSC5 361 aa8.13□□□□□ -1.11
SCARB2-220ENST00000640076 LSM7Q9UK45 103 aaKnown RBP8.13□□□□□ -1.11
SCARB2-220ENST00000640076 DRGXA6NNA5 263 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 AREL1O15033 823 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 LIASO43766 372 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 MAFKO60675 156 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
SCARB2-220ENST00000640076 BPIFB3P59826 476 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 PAFAH1B3Q15102 231 aaKnown RBP8.12□□□□□ -1.11
SCARB2-220ENST00000640076 ZNF77Q15935 545 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 C5orf22Q49AR2 442 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 TTC27Q6P3X3 843 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 TMCO3Q6UWJ1 677 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 Q7L0L9 218 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 KLHL7Q8IXQ5 586 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 FAM217AQ8IXS0 508 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 LGI2Q8N0V4 545 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 MMGT1Q8N4V1 131 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 NPWQ8N729 165 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 TMEM145Q8NBT3 493 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 PPP1R35Q8TAP8 253 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 SLC35B2Q8TB61 432 aa8.12□□□□□ -1.11
SCARB2-220ENST00000640076 IPCEF1Q8WWN9 437 aaPredicted RBP8.12□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms