RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PHTF2Q8N3S3 785 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 RIBC1Q8N443 379 aaPredicted RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 RYBPQ8N488 228 aaPredicted RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 HLA-CQ95604 372 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 TUBGCP5Q96RT8 1024 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 TDRD1Q9BXT4 1180 aaKnown RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 CPEB1Q9BZB8 566 aaKnown RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 TM6SF2Q9BZW4 377 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 TNKS2Q9H2K2 1166 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 ATP13A3Q9H7F0 1226 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 CHRAC1Q9NRG0 131 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 OGFRQ9NZT2 677 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 HECAQ9UBI9 543 aaPredicted RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 PRKAG3Q9UGI9 489 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 RPL26L1Q9UNX3 145 aaKnown RBP11.87□□□□□ -0.51
CLN6-223ENST00000637823 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 RPS6KL1Q9Y6S9 549 aa11.87□□□□□ -0.51
CLN6-223ENST00000637823 TBC1D3BA6NDS4 549 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 C2CD4DB7Z1M9 353 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 POC1B-GALNT4F8VUJ3 575 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 HTRA2O43464 458 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 SOCS5O75159 536 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 CDH16O75309 829 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 PAPSS2O95340 614 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 FOSL2P15408 326 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 GRIA2P42262 883 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 MSH2P43246 934 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 KDSRQ06136 332 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 RASA2Q15283 850 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 E2F5Q15329 346 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 PTPRNQ16849 979 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 ARMC12Q5T9G4 340 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 Q7L0L9 218 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 TERB1Q8NA31 727 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLN6-223ENST00000637823 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 BRSK1Q8TDC3 778 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 EPS8L3Q8TE67 593 aaKnown RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 FRS2Q8WU20 508 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 RMDN1Q96DB5 314 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 PGM2Q96G03 612 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 MYO19Q96H55 970 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 FCRL3Q96P31 734 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 PHF7Q9BWX1 381 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
CLN6-223ENST00000637823 CENPHQ9H3R5 247 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 TRPV5Q9NQA5 729 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 VPS18Q9P253 973 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 TCAF1Q9Y4C2 921 aa11.86□□□□□ -0.51
CLN6-223ENST00000637823 CDH23Q9H251 3354 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 MUC22E2RYF6 1773 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 ZCWPW2A0A1B0GU75 182 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 A0A1W2PQ67 120 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 MROH6A6NGR9 719 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 FAM159BA6NKW6 160 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 TTC34A8MYJ7 566 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 WASH3PC4AMC7 463 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 H3BQF6 201 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 TRAFD1O14545 582 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 RGS16O15492 202 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 FZD6O60353 706 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 KAT7O95251 611 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 PGLSO95336 258 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 C1QAP02745 245 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 APODP05090 189 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 PDHA1P08559 390 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 NMBRP28336 390 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 GCAP28676 217 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 SERPINA4P29622 427 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 TNFRSF4P43489 277 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 CCNHP51946 323 aaPredicted RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 MGAT5Q09328 741 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 MESP2Q0VG99 397 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 SEPT6Q14141 434 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 GALNT3Q14435 633 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 LEXMQ3ZCV2 418 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 ADGRD1Q6QNK2 874 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 DPY19L3Q6ZPD9 716 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 LRRC6Q86X45 466 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 CAMK1DQ8IU85 385 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 SUGP1Q8IWZ8 645 aaKnown RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 KRT222Q8N1A0 295 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 DEFB123Q8N688 67 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 PDCD6IPQ8WUM4 868 aaKnown RBP11.85□□□□□ -0.51
CLN6-223ENST00000637823 PPM1EQ8WY54 764 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
CLN6-223ENST00000637823 ZNF669Q96BR6 464 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms