RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CDC25CP30307 473 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 GMFBP60983 142 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 DPYSL3Q14195 570 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 GCNT7Q6ZNI0 430 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 MAGEE2Q8TD90 523 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SORCS3Q9UPU3 1222 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 KCNE2Q9Y6J6 123 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ABHD14A-ACY1A0A1B0GW23 586 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ALADP13716 330 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 STARP49675 285 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SRP54P61011 504 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 OLFML2AQ68BL7 652 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 AMER2Q8N7J2 671 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 DIP2CQ9Y2E4 1556 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 TMCC2O75069 709 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 NTRK1P04629 796 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SNRPB2P08579 225 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CNSTQ6PJW8 725 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PTCD3Q96EY7 689 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 DGCR6LQ9BY27 220 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 LEF1Q9UJU2 399 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 C3orf18Q9UK00 162 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 AGRPO00253 132 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 TTKP33981 857 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 TTC27Q6P3X3 843 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 GPR135Q8IZ08 494 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 TEFMQ96QE5 360 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PRODHO43272 600 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SNAP91O60641 907 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 KDELR1P24390 212 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CAPGP40121 348 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ADCYAP1R1P41586 468 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ARF5P84085 180 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 BEX3Q00994 111 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 WSCD1Q658N2 575 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SPATA9Q9BWV2 254 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CAB39LQ9H9S4 337 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ZFP14Q9HCL3 533 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 EXD2Q9NVH0 621 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC25A14O95258 325 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CLUP10909 449 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 LPOP22079 712 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PARGQ86W56 976 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 OR4A15Q8NGL6 344 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CHKBQ9Y259 395 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ISM1B1AKI9 464 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FCHO1O14526 889 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FGFR3P22607 806 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 SNX32Q86XE0 403 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 OR10G6Q8NH81 332 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 FNIP1Q8TF40 1166 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 ULBP1Q9BZM6 244 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
CCDC144B-208ENST00000618081 CCDC162PA2VCL2 907 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC28A2O43868 658 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 HGFP14210 728 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 IDO1P14902 403 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 CCT3P49368 545 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 SPIBQ01892 262 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 RASAL3Q86YV0 1011 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 MTF2Q9Y483 593 aaPredicted RBP11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 GIMD1P0DJR0 217 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 CCR3P51677 355 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 RAB25P57735 213 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 APTXQ7Z2E3 356 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 ARHGEF19Q8IW93 802 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 PTGFRNQ9P2B2 879 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 PSMD13Q9UNM6 376 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 H0Y858 1186 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 XKRYO14609 159 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 SLITRK3O94933 977 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 ARFIP1P53367 373 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 MANFP55145 182 aaKnown RBP11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 PYDC2Q56P42 97 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 ZNF184Q99676 751 aaPredicted RBP11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 C3orf14Q9HBI5 128 aa11.22□□□□□ -0.61
CCDC144B-208ENST00000618081 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms