RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LATS1O95835 1130 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 EPOP01588 193 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 SERPINE1P05121 402 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 C8AP07357 584 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 GJA1P17302 382 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 LBX1P52954 281 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 PTPRCAPQ14761 206 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 TAF1BQ53T94 588 aaPredicted RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 LILRA6Q6PI73 481 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 OR6P1Q8NGX9 317 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 MRPS31Q92665 395 aaKnown RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 BADQ92934 168 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 CLP1Q92989 425 aaKnown RBP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 TMEM106CQ9BVX2 250 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 LRRC3Q9BY71 257 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 ZFP69BQ9UJL9 534 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 SSX2IPQ9Y2D8 614 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 ANKRD6Q9Y2G4 727 aa17.47■□□□□ 0.39
PCDHGC3-205ENST00000617641 G3V2L1 256 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 INSIG1O15503 277 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 DNAJC6O75061 913 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 NDST3O95803 873 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CKMP06732 381 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CR2P20023 1033 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 SLC1A6P48664 564 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 RAB10P61026 200 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 ITGA9Q13797 1035 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 RBM20Q5T481 1227 aaKnown RBP17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CCDC91Q7Z6B0 441 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 HJURPQ8NCD3 748 aaPredicted RBP17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 WFDC5Q8TCV5 224 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CALML6Q8TD86 181 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 KCTD4Q8WVF5 259 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 TMA16Q96EY4 203 aaKnown RBP17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 TASP1Q9H6P5 420 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 SCUBE2Q9NQ36 999 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CPSF2Q9P2I0 782 aaKnown RBP17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
PCDHGC3-205ENST00000617641 CD160O95971 181 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 RALBP11234 206 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 SERPINB3P29508 390 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 TAS2R39P59534 338 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 PRAMEP78395 509 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC12A1Q13621 1099 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 HSF5Q4G112 596 aaPredicted RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 ATG14Q6ZNE5 492 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 KIAA0408Q6ZU52 694 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 LDB1Q86U70 411 aaPredicted RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 SPNS2Q8IVW8 549 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 CENPLQ8N0S6 344 aaPredicted RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 KREMEN2Q8NCW0 462 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 NDNQ99608 321 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 SUDS3Q9H7L9 328 aaPredicted RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 MARCH4Q9P2E8 410 aaPredicted RBP17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 INSL6Q9Y581 213 aa17.46■□□□□ 0.38
PCDHGC3-205ENST00000617641 LCHNA4D1U4 455 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 GFRA2O00451 464 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC7A4O43246 635 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 LUC7L3O95232 432 aaKnown RBP17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 ADH1AP07327 375 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 STMN1P16949 149 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 TARSP26639 723 aaKnown RBP17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 ARRB2P32121 409 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 GLRBP48167 497 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 ERVFC1P60507 584 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 PPIGQ13427 754 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 CLNKQ7Z7G1 428 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 TBC1D1Q86TI0 1168 aaPredicted RBP17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 KIF2BQ8N4N8 673 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 TBATAQ96M53 351 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 MFSD1Q9H3U5 465 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 RUVBL2Q9Y230 463 aaKnown RBP17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
PCDHGC3-205ENST00000617641 A0A1W2PRU2 124 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 TK2O00142 265 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 ZMPSTE24O75844 475 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 TMCC1O94876 653 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 UNC5CO95185 931 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 POLD2P49005 469 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 CCDC149Q6ZUS6 474 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 CILP2Q8IUL8 1156 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SPATA6LQ8N4H0 392 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 OR13C4Q8NGS5 318 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 BRSK1Q8TDC3 778 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 SKA1Q96BD8 255 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 PRR11Q96HE9 360 aaPredicted RBP17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 TSNARE1Q96NA8 513 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 FEM1AQ9BSK4 669 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 KCNK4Q9NYG8 393 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 CFAP97Q9P2B7 532 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 VPS28Q9UK41 221 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 DNAJC16Q9Y2G8 782 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 ACOT9Q9Y305 439 aa17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 TYW5A2RUC4 315 aaKnown RBP17.44■□□□□ 0.38
PCDHGC3-205ENST00000617641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms