RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 LZTR1Q8N653 840 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 SYN2Q92777 582 aaPredicted RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 IQCDQ96DY2 449 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 APOLD1Q96LR9 279 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRKN-209ENST00000612485 WRAP53Q9BUR4 548 aaKnown RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 CINPQ9BW66 212 aaPredicted RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 NRSN2Q9GZP1 204 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 ATP13A3Q9H7F0 1226 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 TDRD6O60522 2096 aaKnown RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 ACACAQ13085 2346 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 H3BRJ5 948 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 RIOK3O14730 519 aaKnown RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 AQP9O43315 295 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 NEBLO76041 1014 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 GP1BAP07359 652 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 SERPINA4P29622 427 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 UBASH3AP57075 661 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 IL10RBQ08334 325 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 EIF2B5Q13144 721 aaKnown RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 BOLA3Q53S33 107 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 TPRG1LQ5T0D9 272 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 ZCCHC8Q6NZY4 707 aaKnown RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 SRLQ86TD4 932 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 ARHGAP12Q8IWW6 846 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 TP53I13Q8NBR0 393 aaPredicted RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 LMX1AQ8TE12 382 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 CAAP1Q9H8G2 361 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 PCDH12Q9NPG4 1184 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 NCKIPSDQ9NZQ3 722 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 CWC15Q9P013 229 aaKnown RBP17.52■□□□□ 0.4
PRKN-209ENST00000612485 SPASTQ9UBP0 616 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 KLF15Q9UIH9 416 aa17.52■□□□□ 0.4
PRKN-209ENST00000612485 APC2O95996 2303 aa17.52■□□□□ 0.39
PRKN-209ENST00000612485 DSPP15924 2871 aaKnown RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 BUB1BO60566 1050 aaPredicted RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 MT-CO3P00414 261 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 SERPING1P05155 500 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 PBX1P40424 430 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 ARL4AP40617 200 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 NSUN2Q08J23 767 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKN-209ENST00000612485 DPYSQ14117 519 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 PIGHQ14442 188 aaPredicted RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 LRRC14Q15048 493 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 HGSNATQ68CP4 663 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 C19orf48Q6RUI8 117 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 MACC1Q6ZN28 852 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 CAMK1DQ8IU85 385 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 NPWQ8N729 165 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 DCBLD1Q8N8Z6 715 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 TBATAQ96M53 351 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 SCUBE2Q9NQ36 999 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 MBNL1Q9NR56 388 aaKnown RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 APOBEC3BQ9UH17 382 aaKnown RBP17.51■□□□□ 0.39
PRKN-209ENST00000612485 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 ATP8A1Q9Y2Q0 1164 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 AK5Q9Y6K8 562 aa17.51■□□□□ 0.39
PRKN-209ENST00000612485 TMEM110-MUSTN1A8MSY1 372 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 TPP1O14773 563 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 C6P13671 934 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 EIF4A3P38919 411 aaKnown RBP17.5■□□□□ 0.39
PRKN-209ENST00000612485 RGRP47804 291 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 PEX5P50542 639 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 RENBPP51606 427 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 ZBED6P86452 979 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 BCL2L1Q07817 233 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 RTP5Q14D33 572 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 IRF4Q15306 451 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 KDM7AQ6ZMT4 941 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 ARHGAP36Q6ZRI8 547 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 PHACTR4Q8IZ21 702 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 PAF1Q8N7H5 531 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 ZNF599Q96NL3 588 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 IL12RB2Q99665 862 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 SLC13A1Q9BZW2 595 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 CAPN11Q9UMQ6 739 aa17.5■□□□□ 0.39
PRKN-209ENST00000612485 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 LY6G6EA0A0G2JKS1 128 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 CFAP69A5D8W1 941 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 LZTS3O60299 673 aaPredicted RBP17.49■□□□□ 0.39
PRKN-209ENST00000612485 OPA1O60313 960 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 PTMSP20962 102 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 IL1R2P27930 398 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 MMP12P39900 470 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 LIG3P49916 1009 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 BLKP51451 505 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 POLR2LP62875 67 aaKnown RBP17.49■□□□□ 0.39
PRKN-209ENST00000612485 PPARDQ03181 441 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 AGERQ15109 404 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 SMTNL2Q2TAL5 461 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 COL28A1Q2UY09 1125 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 DEFB133Q30KQ1 61 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 FAXCQ5TGI0 409 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 TMCO4Q5TGY1 634 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 TMCO3Q6UWJ1 677 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 RBFAQ8N0V3 343 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms