RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PMS2P1A4D2B8 440 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 LGALS16A8MUM7 142 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 MUSKO15146 869 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 BUB1BO60566 1050 aaPredicted RBP18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 PIGNO95427 931 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 SUOXP51687 545 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 C19orf57Q0VDD7 668 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 IRF4Q15306 451 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 WSCD2Q2TBF2 565 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 PARP15Q460N3 678 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 SCYL2Q6P3W7 929 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 CRTC1Q6UUV9 634 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 VCPIP1Q96JH7 1222 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 MCEEQ96PE7 176 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 CNPY3Q9BT09 278 aa18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 WRAP53Q9BUR4 548 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 HELZ2Q9BYK8 2649 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-208ENST00000601220 CFAP46Q8IYW2 2715 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 MGAQ8IWI9 3026 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 CREB3O43889 395 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 TCEA3O75764 348 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 PEX5P50542 639 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 AIF1P55008 147 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 PPARDQ03181 441 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 AGERQ15109 404 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 FAXCQ5TGI0 409 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 DNAJC24Q6P3W2 148 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 RBM44Q6ZP01 1051 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 ZSWIM9Q86XI8 627 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 ZNF354CQ86Y25 554 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 MCOLN2Q8IZK6 566 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 ZNF843Q8N446 348 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 NEK11Q8NG66 645 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 SNRNP27Q8WVK2 155 aaKnown RBP18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 EXOC2Q96KP1 924 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 SYT11Q9BT88 431 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 C1QTNF7Q9BXJ2 289 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 SLC13A1Q9BZW2 595 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 SUV39H2Q9H5I1 410 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 COQ6Q9Y2Z9 468 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 PCDHGA8Q9Y5G5 932 aa18.17■□□□□ 0.5
CHMP2A-208ENST00000601220 J3KR12 359 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 NTN3O00634 580 aaPredicted RBP18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 TPM2P07951 284 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 ANXA6P08133 673 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 HK3P52790 923 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 NCAPHQ15003 741 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 LRRC14Q15048 493 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 UGP2Q16851 508 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 ALG11Q2TAA5 492 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 C3orf38Q5JPI3 329 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 KCTD16Q68DU8 428 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 ARFGAP1Q8N6T3 406 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 KCNE4Q8WWG9 221 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 DPH1Q9BZG8 443 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 CATSPERBQ9H7T0 1116 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 CPNE5Q9HCH3 593 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 PCDH12Q9NPG4 1184 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 THSD1Q9NS62 852 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 PADI4Q9UM07 663 aa18.16■□□□□ 0.5
CHMP2A-208ENST00000601220 SHROOM3Q8TF72 1996 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 CDRT15L2A8MXV6 281 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 FGF10O15520 208 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 PRAMEF11O60813 436 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 C6P13671 934 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 RGRP47804 291 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 RPIAP49247 311 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 TMPRSS3P57727 454 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 UBXN1Q04323 297 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 ELP6Q0PNE2 266 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 AFMIDQ63HM1 303 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 ACAD10Q6JQN1 1059 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 LVRNQ6Q4G3 990 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 FSTL5Q8N475 847 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 GLMNQ92990 594 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 NAT6Q93015 286 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 TSACCQ96A04 125 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 ZNF641Q96N77 438 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 CCDC3Q9BQI4 270 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 SLC39A8Q9C0K1 460 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 TAS2R14Q9NYV8 317 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 UBA2Q9UBT2 640 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 RABGEF1Q9UJ41 708 aa18.15■□□□□ 0.5
CHMP2A-208ENST00000601220 TMEM110-MUSTN1A8MSY1 372 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 ERVH48-1M5A8F1 160 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 KLK10O43240 276 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 HTR7P34969 479 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 MMP12P39900 470 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 CSNK1DP48730 415 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 NDST2P52849 883 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 UCNP55089 124 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 MAMLD1Q13495 774 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 INPP5AQ14642 412 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 CA9Q16790 459 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 CAMK1DQ8IU85 385 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 WDR48Q8TAF3 677 aa18.14■□□□□ 0.49
CHMP2A-208ENST00000601220 CELF6Q96J87 481 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms