RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MYF5P13349 255 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 PSMA2P25787 234 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 TBX2Q13207 712 aaPredicted RBP18.94■□□□□ 0.62
PNKP-213ENST00000599543 TRIM14Q14142 442 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 LMX1AQ8TE12 382 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 BTN2A2Q8WVV5 523 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 CENPTQ96BT3 561 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 VCPIP1Q96JH7 1222 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 DEPDC7Q96QD5 511 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 WRAP53Q9BUR4 548 aaKnown RBP18.94■□□□□ 0.62
PNKP-213ENST00000599543 ABCG4Q9H172 646 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 ABHD10Q9NUJ1 306 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 PARVAQ9NVD7 372 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 UBA2Q9UBT2 640 aaPredicted RBP18.94■□□□□ 0.62
PNKP-213ENST00000599543 KLF15Q9UIH9 416 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 CSNK1G3Q9Y6M4 447 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 RP1P56715 2156 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 LY6G6EA0A0G2JKS1 128 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 TLX3O43711 291 aaPredicted RBP18.93■□□□□ 0.62
PNKP-213ENST00000599543 TPM1P09493 284 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 IGFALSP35858 605 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 EIF2S3P41091 472 aaKnown RBP18.93■□□□□ 0.62
PNKP-213ENST00000599543 OGDHQ02218 1023 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 ELP6Q0PNE2 266 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 MAMLD1Q13495 774 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 GRM3Q14832 879 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 DEFB133Q30KQ1 61 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 TPRG1LQ5T0D9 272 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 CFAP58Q5T655 872 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 IFI44Q8TCB0 444 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 MAPK15Q8TD08 544 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 DNAJC7Q99615 494 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 CHP1Q99653 195 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 IL12RB2Q99665 862 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 CPEB1Q9BZB8 566 aaKnown RBP18.93■□□□□ 0.62
PNKP-213ENST00000599543 MYO1AQ9UBC5 1043 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 SPASTQ9UBP0 616 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 LHX3Q9UBR4 397 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 APOBEC3BQ9UH17 382 aaKnown RBP18.93■□□□□ 0.62
PNKP-213ENST00000599543 AP4E1Q9UPM8 1137 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 PCDHB1Q9Y5F3 818 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 U3KQA8 63 aa18.93■□□□□ 0.62
PNKP-213ENST00000599543 SHROOM3Q8TF72 1996 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 EIF3CLB5ME19 914 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 AKR1B15C9JRZ8 316 aaPredicted RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 RIOK3O14730 519 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 INSIG1O15503 277 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 PIGNO95427 931 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 TIMP2P16035 220 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 ACTN2P35609 894 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 SUOXP51687 545 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 NDST2P52849 883 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 YPEL5P62699 121 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 EIF2B5Q13144 721 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 CDKN3Q16667 212 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 CDCP2Q5VXM1 449 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 SNIP1Q8TAD8 396 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 FGF11Q92914 225 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 ZNF653Q96CK0 615 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 CRELD1Q96HD1 420 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 CELF6Q96J87 481 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 EIF3CQ99613 913 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 TRIM7Q9C029 511 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 DHX35Q9H5Z1 703 aaKnown RBP18.92■□□□□ 0.62
PNKP-213ENST00000599543 LRRC19Q9H756 370 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 GPATCH2LQ9NWQ4 482 aa18.92■□□□□ 0.62
PNKP-213ENST00000599543 ARHGAP42A6NI28 874 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
PNKP-213ENST00000599543 TOR1BO14657 336 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 TPP1O14773 563 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 DAPK3O43293 454 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 ITPKBP27987 946 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 CYTH1Q15438 398 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 TBC1D25Q3MII6 688 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 SOWAHCQ53LP3 525 aaPredicted RBP18.91■□□□□ 0.62
PNKP-213ENST00000599543 ERAP2Q6P179 960 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 MACC1Q6ZN28 852 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 PHACTR4Q8IZ21 702 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 RBFAQ8N0V3 343 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 SLC13A1Q9BZW2 595 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 PDFQ9HBH1 243 aa18.91■□□□□ 0.62
PNKP-213ENST00000599543 CNOT8Q9UFF9 292 aaKnown RBP18.91■□□□□ 0.62
PNKP-213ENST00000599543 BZW2Q9Y6E2 419 aaKnown RBP18.91■□□□□ 0.62
PNKP-213ENST00000599543 LRP4O75096 1905 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 CPED1A4D0V7 1026 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 J3KR12 359 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 PRAMEF11O60813 436 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 CSO75390 466 aaKnown RBP18.9■□□□□ 0.62
PNKP-213ENST00000599543 ITIH2P19823 946 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 HNRNPH3P31942 346 aaKnown RBP18.9■□□□□ 0.62
PNKP-213ENST00000599543 IRF4Q15306 451 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 NR0B2Q15466 257 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 UGP2Q16851 508 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 PRRT3Q5FWE3 981 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 CCDC122Q5T0U0 273 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 ERMARDQ5T6L9 678 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 PLEKHA7Q6IQ23 1121 aa18.9■□□□□ 0.62
PNKP-213ENST00000599543 TP53I13Q8NBR0 393 aaPredicted RBP18.9■□□□□ 0.62
PNKP-213ENST00000599543 HCAR2Q8TDS4 363 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms