RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	SIGLEC16	A6NMB1	481 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580		H3BM21	787 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PYCARD-AS1	I3L0S3	204 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TM7SF2	O76062	418 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GM2A	P17900	193 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GPD1	P21695	349 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	EPHB2	P29323	1055 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ETFB	P38117	255 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GSC	P56915	257 aa	Predicted RBP	11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CLN3	Q13286	438 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CA9	Q16790	459 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ARL13B	Q3SXY8	428 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	FAXC	Q5TGI0	409 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	KIAA1614	Q5VZ46	1190 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	MACC1	Q6ZN28	852 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RBM44	Q6ZP01	1051 aa	Known RBP	11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	MON1B	Q7L1V2	547 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	APTX	Q7Z2E3	356 aa	Known RBP	11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	SLFN11	Q7Z7L1	901 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	DNAAF5	Q86Y56	855 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CAMK1D	Q8IU85	385 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	LSMEM2	Q8N112	164 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	UMODL1-AS1	Q8N2C9	162 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PELI3	Q8N2H9	469 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	KY	Q8NBH2	561 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CCDC3	Q9BQI4	270 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	HSD3B7	Q9H2F3	369 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	LRRC19	Q9H756	370 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PDF	Q9HBH1	243 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PCDH12	Q9NPG4	1184 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GPATCH2L	Q9NWQ4	482 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TAS2R14	Q9NYV8	317 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ADAM22	Q9P0K1	906 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	FZD10	Q9ULW2	581 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PCDHGA8	Q9Y5G5	932 aa		11.14	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	WASH4P	A8MWX3	477 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ERVH48-1	M5A8F1	160 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	NOBOX	O60393	691 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TNFSF15	O95150	251 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ANXA6	P08133	673 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	C6	P13671	934 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	HGF	P14210	728 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ZNF143	P52747	638 aa	Predicted RBP	11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	HK3	P52790	923 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	THOP1	P52888	689 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TMPRSS3	P57727	454 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RHOA	P61586	193 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	YPEL5	P62699	121 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CCL7	P80098	99 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PPARD	Q03181	441 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	VAC14	Q08AM6	782 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	INPP5A	Q14642	412 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	SYCP1	Q15431	976 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	UGP2	Q16851	508 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	INO80D	Q53TQ3	878 aa	Predicted RBP	11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	SCYL2	Q6P3W7	929 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	FOXR1	Q6PIV2	292 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ARHGAP36	Q6ZRI8	547 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TMPRSS9	Q7Z410	1059 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CLEC14A	Q86T13	490 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ZNF605	Q86T29	641 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ZSCAN30	Q86W11	494 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	HID1	Q8IV36	788 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TP53INP2	Q8IXH6	220 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	MSANTD4	Q8NCY6	345 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PCDH19	Q8TAB3	1148 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CXorf40A	Q8TE69	158 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	BTN2A2	Q8WVV5	523 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CELF6	Q96J87	481 aa	Known RBP	11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TBATA	Q96M53	351 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GDAP1L1	Q96MZ0	367 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	SYT11	Q9BT88	431 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	OSBPL1A	Q9BXW6	950 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CPEB1	Q9BZB8	566 aa	Known RBP	11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	NUP62CL	Q9H1M0	184 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	THSD1	Q9NS62	852 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	LMBRD1	Q9NUN5	540 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	SIRPG	Q9P1W8	387 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GULP1	Q9UBP9	304 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	HPCAL4	Q9UM19	191 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	OR1A2	Q9Y585	309 aa		11.13	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TTC24	A2A3L6	582 aa	Predicted RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TMEM202	A6NGA9	273 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580		K7ENP7	123 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RIOK3	O14730	519 aa	Known RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CREB3	O43889	395 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RBMS1	P29558	406 aa	Known RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	STAT1	P42224	750 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	LIG3	P49916	1009 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	COPB1	P53618	953 aa	Known RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	GEMIN4	P57678	1058 aa	Known RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RALGDS	Q12967	914 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	PTK2B	Q14289	1009 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	LRRC14	Q15048	493 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TGIF1	Q15583	401 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	INO80C	Q6PI98	192 aa	Predicted RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	ENPP7	Q6UWV6	458 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	TRIM72	Q6ZMU5	477 aa		11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.12	□□□□□ -0.63
GRAMD1A-209	ENST00000598580	RD3	Q7Z3Z2	195 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms