RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 PRR11Q96HE9 360 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 PDFQ9HBH1 243 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 EVA1BQ9NVM1 165 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 SIRPGQ9P1W8 387 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 SPASTQ9UBP0 616 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 SALL4Q9UJQ4 1053 aa12.23□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZSCAN5CA6NGD5 496 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 J3KR12 359 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 TPP1O14773 563 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 YY2O15391 372 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 KLK10O43240 276 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 CALB1P05937 261 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 ANXA6P08133 673 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 C6P13671 934 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 SERINC3Q13530 473 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 PTK2BQ14289 1009 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 CA9Q16790 459 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 WSCD2Q2TBF2 565 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 PPP1R15BQ5SWA1 713 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 RBM44Q6ZP01 1051 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 HID1Q8IV36 788 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF843Q8N446 348 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 NEK11Q8NG66 645 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCDH19Q8TAB3 1148 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 BTN2A2Q8WVV5 523 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 CELF6Q96J87 481 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 CCDC3Q9BQI4 270 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 SLC13A1Q9BZW2 595 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 SEMA4CQ9C0C4 833 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 RETREG1Q9H6L5 497 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 TAS2R14Q9NYV8 317 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 DKK3Q9UBP4 350 aa12.22□□□□□ -0.45
SOX2-OT-228ENST00000597828 AHCTF1Q8WYP5 2266 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 TSPAN11A1L157 253 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 LGALS16A8MUM7 142 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 LMO7DNF2Z398 122 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 BUB1BO60566 1050 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCCBP05166 539 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 ZNF143P52747 638 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 TPI1P60174 286 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 ERVPABLB-1P60509 514 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 YPEL5P62699 121 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 PPARDQ03181 441 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 RAD51Q06609 339 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 INO80DQ53TQ3 878 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 APTXQ7Z2E3 356 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 RD3Q7Z3Z2 195 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 SFTPA2Q8IWL1 248 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 LSMEM2Q8N112 164 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 PDXPQ96GD0 296 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 PEBP4Q96S96 227 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 AGPAT1Q99943 283 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 HSD3B7Q9H2F3 369 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 GULP1Q9UBP9 304 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 UBA2Q9UBT2 640 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 MFHAS1Q9Y4C4 1052 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 OR1A2Q9Y585 309 aa12.21□□□□□ -0.45
SOX2-OT-228ENST00000597828 BSNQ9UPA5 3926 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 WASH4PA8MWX3 477 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 TK2O00142 265 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 AGRPO00253 132 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 TPM2P07951 284 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 KRT10P13645 584 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 PTMSP20962 102 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 XPAP23025 273 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 MMP12P39900 470 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 HK3P52790 923 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 YBEYP58557 167 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 SKOR1P84550 965 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 UBXN1Q04323 297 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 RALGDSQ12967 914 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 SPIDRQ14159 915 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 NFATC4Q14934 902 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 LRRC14Q15048 493 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 UGP2Q16851 508 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 PARP15Q460N3 678 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 BROXQ5VW32 411 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 ENPP7Q6UWV6 458 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 CAMK1DQ8IU85 385 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 UMODL1-AS1Q8N2C9 162 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 PLA2G15Q8NCC3 412 aa12.2□□□□□ -0.46
SOX2-OT-228ENST00000597828 TSEN2Q8NCE0 465 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms