RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 TCF12Q99081 682 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 OSBPL6Q9BZF3 934 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 WDCPQ9H6R7 721 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 PLGRKTQ9HBL7 147 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 TNFRSF12AQ9NP84 129 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 CD300AQ9UGN4 299 aa17.52■□□□□ 0.4
ARHGEF1-213ENST00000595897 NUP205Q92621 2012 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 A0A087X1B8 175 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 SMIM28A0A1B0GU29 152 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 IPO13O94829 963 aaKnown RBP17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 KCNA5P22460 613 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 YWHAQP27348 245 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 AIF1P55008 147 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 INTS6LQ5JSJ4 861 aaKnown RBP17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 TBCELQ5QJ74 424 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 PPP4R4Q6NUP7 873 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 TRPC4APQ8TEL6 797 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 TFAP2CQ92754 450 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 RNF34Q969K3 372 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 FICDQ9BVA6 458 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 MEAF6Q9HAF1 191 aa17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 DUS2Q9NX74 493 aaKnown RBP17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 GMPR2Q9P2T1 348 aaKnown RBP17.52■□□□□ 0.39
ARHGEF1-213ENST00000595897 BMP10O95393 424 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 FYNP06241 537 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 CPB1P15086 417 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 PNPLA4P41247 253 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 DNAJB13P59910 316 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 PPIL2Q13356 520 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 KIF19Q2TAC6 998 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 CTU1Q7Z7A3 348 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 OSTM1Q86WC4 334 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 EDEM1Q92611 657 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 ISOC1Q96CN7 298 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 TKTL2Q9H0I9 626 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 VPS45Q9NRW7 570 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 GDAP2Q9NXN4 497 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 TMEM181Q9P2C4 612 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 SARDHQ9UL12 918 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 FAM149AA5PLN7 773 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 PSMD3O43242 534 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 LRIG2O94898 1065 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 TSPAN8P19075 237 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 POLD2P49005 469 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 HCAR3P49019 387 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 NME5P56597 212 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 CLEC6AQ6EIG7 209 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 CAMK1DQ8IU85 385 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 FAM110BQ8TC76 370 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 RANBP9Q96S59 729 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 OSMRQ99650 979 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 COLEC11Q9BWP8 271 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 ZNF510Q9Y2H8 683 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 ZNF711Q9Y462 761 aa17.51■□□□□ 0.39
ARHGEF1-213ENST00000595897 USP17L7P0C7H9 530 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 PAMP19021 973 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 SCAPQ12770 1279 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 PSMD5Q16401 504 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 SV2CQ496J9 727 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 AGAP9Q5VTM2 703 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 CNTN4Q8IWV2 1026 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 ANKFN1Q8N957 763 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 PCYOX1LQ8NBM8 494 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 C12orf43Q96C57 262 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 CCDC126Q96EE4 140 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 UHRF1Q96T88 793 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 FSD1LQ9BXM9 530 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 ARHGEF38Q9NXL2 777 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 SFMBT1Q9UHJ3 866 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 A8MT66 165 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 GIPC1O14908 333 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 PMPCBO75439 489 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 POU4F1Q01851 419 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 FAM219BQ5XKK7 198 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 ERMP1Q7Z2K6 904 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 PPP1R14BQ96C90 147 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 FBRSL1Q9HCM7 1045 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 SMOXQ9NWM0 555 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 MCM3APO60318 1980 aa17.5■□□□□ 0.39
ARHGEF1-213ENST00000595897 ASB14A6NK59 587 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 AURKAO14965 403 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 XPOTO43592 962 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 BMP2P12643 396 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 ATP6V1B2P21281 511 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 ARNTP27540 789 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 TPP2P29144 1249 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 ETFBP38117 255 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 ARCN1P48444 511 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 ZBED5Q49AG3 693 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 RBM20Q5T481 1227 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 FAM45BPQ6NSW5 357 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 PATL1Q86TB9 770 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 SHCBP1Q8NEM2 672 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 FAM45AQ8TCE6 357 aa17.49■□□□□ 0.39
ARHGEF1-213ENST00000595897 CYGBQ8WWM9 190 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms