RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 AFF3P51826 1226 aaKnown RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 RACK1P63244 317 aaKnown RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 NSUN2Q08J23 767 aaKnown RBP eCLIP11.63□□□□□ -0.55
VMP1-211ENST00000591315 NIPAL4Q0D2K0 466 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 ZBTB17Q13105 803 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 HLA-BQ31612 363 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 MARC1Q5VT66 337 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 NT5DC3Q86UY8 548 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 LRRC8AQ8IWT6 810 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 RCOR2Q8IZ40 523 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 CNTD1Q8N815 330 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 KIAA1524Q8TCG1 905 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 OLFM3Q96PB7 478 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 SEMA3CQ99985 751 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 MAK16Q9BXY0 300 aaKnown RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 RBM22Q9NW64 420 aaKnown RBP eCLIP11.63□□□□□ -0.55
VMP1-211ENST00000591315 DKK3Q9UBP4 350 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 COQ6Q9Y2Z9 468 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 PCDHA3Q9Y5H8 950 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 SPEGQ15772 3267 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 GOLGA4Q13439 2230 aaKnown RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 UPK3BL1B0FP48 263 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 UPK3BL2E5RIL1 263 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 NEMP1O14524 444 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 GIPC1O14908 333 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 AP1G1O43747 822 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ZRANB2O95218 330 aaKnown RBP eCLIP11.62□□□□□ -0.55
VMP1-211ENST00000591315 CCNB1P14635 433 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 CCNCP24863 283 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 CTNNA2P26232 953 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 CD38P28907 300 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 CTNNA1P35221 906 aaKnown RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 CTSKP43235 329 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 GRIA4P48058 902 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 LIMK1P53667 647 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 IL9RQ01113 521 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 BCL2L1Q07817 233 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 PPIDQ08752 370 aaKnown RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 ITKQ08881 620 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 AP1B1Q10567 949 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 HNRNPDQ14103 355 aaKnown RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 UGP2Q16851 508 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 SETMARQ53H47 684 aaPredicted RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 ODF2Q5BJF6 829 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 NAPEPLDQ6IQ20 393 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 GCNT7Q6ZNI0 430 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 RABEPKQ7Z6M1 372 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ADAT2Q7Z6V5 191 aaKnown RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 CCDC50Q8IVM0 306 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 CCDC13Q8IYE1 715 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 TMEM145Q8NBT3 493 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 EXD1Q8NHP7 514 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ARRDC2Q8TBH0 407 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 HDAC11Q96DB2 347 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ECHDC3Q96DC8 303 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 FEM1CQ96JP0 617 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 CAMK1GQ96NX5 476 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 NUDCD1Q96RS6 583 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 KLF6Q99612 283 aaPredicted RBP11.62□□□□□ -0.55
VMP1-211ENST00000591315 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 SLC17A9Q9BYT1 436 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 GAREM1Q9H706 876 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 ATP13A3Q9H7F0 1226 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
VMP1-211ENST00000591315 POM121BA6NF01 834 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 VILLO15195 856 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 ARHGAP6O43182 974 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 FOXD2O60548 495 aaPredicted RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 SYPP08247 313 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 MMP2P08253 660 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 PDHA1P08559 390 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 PYGMP11217 842 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 CD59P13987 128 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 MX2P20592 715 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 SERPINA4P29622 427 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 RENBPP51606 427 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 ATXN3P54252 364 aaPredicted RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 AP1S1P61966 158 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 RPS21P63220 83 aaKnown RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 CCDC15Q0P6D6 951 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 RALGDSQ12967 914 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 PUM1Q14671 1186 aaKnown RBP eCLIP11.61□□□□□ -0.55
VMP1-211ENST00000591315 SHBQ15464 509 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 TPRG1LQ5T0D9 272 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 NEK5Q6P3R8 708 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 LRRC49Q8IUZ0 686 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 DEFB124Q8NES8 71 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 PDCD6IPQ8WUM4 868 aaKnown RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms