RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 PRPF39Q86UA1 669 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 CCDC117Q8IWD4 279 aaPredicted RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 UNC45BQ8IWX7 931 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 RBFAQ8N0V3 343 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 SLC22A18ASQ8N1D0 253 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 GUF1Q8N442 669 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 DCBLD1Q8N8Z6 715 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 MFSD2AQ8NA29 543 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 NETO2Q8NC67 525 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 RNF214Q8ND24 703 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 ZNF248Q8NDW4 579 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 IFI44Q8TCB0 444 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 MAPK15Q8TD08 544 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 EPS8L3Q8TE67 593 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 FRS2Q8WU20 508 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 SLC35F5Q8WV83 523 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 KCNE4Q8WWG9 221 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 OR8D1Q8WZ84 308 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 RNF34Q969K3 372 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 ALKBH8Q96BT7 664 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 ATXN7L3BQ96GX2 97 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 PPP1R13BQ96KQ4 1090 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 APOLD1Q96LR9 279 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 SERPINB11Q96P15 392 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 SLC38A3Q99624 504 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 UBXN6Q9BZV1 441 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 DNAI2Q9GZS0 605 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 TCEAL2Q9H3H9 227 aaPredicted RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 FBRSQ9HAH7 460 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 CNGB3Q9NQW8 809 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 GPN3Q9UHW5 284 aaPredicted RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 GGT7Q9UJ14 662 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 VANGL2Q9ULK5 521 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 FZD4Q9ULV1 537 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 ZFR2Q9UPR6 939 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 ITM2BQ9Y287 266 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 U3KQA8 63 aa5.71□□□□□ -1.5
CHUK-203ENST00000588656 UTP20O75691 2785 aaKnown RBP5.71□□□□□ -1.5
CHUK-203ENST00000588656 BSNQ9UPA5 3926 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 TARSL2A2RTX5 802 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 POM121BA6NF01 834 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 HMGB1P1B2RPK0 211 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 E9PAM4 449 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 F5H5T6 163 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 MUSKO15146 869 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 CETN3O15182 167 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 MAPK13O15264 365 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 IRAK2O43187 625 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 SMAD6O43541 496 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 LATO43561 262 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 OPA1O60313 960 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 PIAS2O75928 621 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 CNTN5O94779 1100 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 LETM1O95202 739 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 PCDH8O95206 1070 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 LATS1O95835 1130 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 TRUB2O95900 331 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 SRPRAP08240 638 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 PNMA6AP0CW24 399 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 HGFP14210 728 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 TFE3P19532 575 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 ARNTP27540 789 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 NNMTP40261 264 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 RXRGP48443 463 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 FMO5P49326 533 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 ZNF445P59923 1031 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 NFATC3Q12968 1075 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 FGL2Q14314 439 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 ELAVL3Q14576 367 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 E2F5Q15329 346 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 TGIF1Q15583 401 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 DLG2Q15700 870 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 SETMARQ53H47 684 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 ALFQ53S48 1182 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 PIP5KL1Q5T9C9 394 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 BROXQ5VW32 411 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 FBXL22Q6P050 247 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 LCLAT1Q6UWP7 414 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 LEKR1Q6ZMV7 388 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 EFL1Q7Z2Z2 1120 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 TFAP2DQ7Z6R9 452 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 HSCBQ8IWL3 235 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 OR6K2Q8NGY2 324 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 OR4C6Q8NH72 309 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 ASB11Q8WXH4 323 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 KCTD13Q8WZ19 329 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 SLC35C1Q96A29 364 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 CCDC47Q96A33 483 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 SLC39A13Q96H72 371 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 SGSM3Q96HU1 749 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 RPRD1AQ96P16 312 aaPredicted RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 NT5C1BQ96P26 610 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 SPAG5Q96R06 1193 aa5.7□□□□□ -1.5
CHUK-203ENST00000588656 GTPBP4Q9BZE4 634 aaKnown RBP5.7□□□□□ -1.5
CHUK-203ENST00000588656 SCAND2PQ9GZW5 306 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms