RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RTP5Q14D33 572 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 LRRC14Q15048 493 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 AGERQ15109 404 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 ELOCQ15369 112 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 RALGPS1Q5JS13 557 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
ACTN4-209ENST00000586538 LEKR1Q6ZMV7 388 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 ZNF571Q7Z3V5 609 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-209ENST00000586538 LRRC49Q8IUZ0 686 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 DCBLD1Q8N8Z6 715 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 CENPTQ96BT3 561 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 APOLD1Q96LR9 279 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 KLF6Q99612 283 aaPredicted RBP11.36□□□□□ -0.59
ACTN4-209ENST00000586538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.36□□□□□ -0.59
ACTN4-209ENST00000586538 ISCUQ9H1K1 167 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 PDFQ9HBH1 243 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 SEPT3Q9UH03 358 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 ATP8A1Q9Y2Q0 1164 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
ACTN4-209ENST00000586538 GOLGA4Q13439 2230 aaKnown RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 AKAP13Q12802 2813 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 A0A087WV48 116 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 K7ESM1 405 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 RNF103O00237 685 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 TAF4O00268 1085 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 DFFAO00273 331 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 RAD51BO15315 384 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 MMP20O60882 483 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 LRCH4O75427 683 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 MT-CO3P00414 261 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 SERPING1P05155 500 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 ANXA6P08133 673 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 ERCC2P18074 760 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 PAPOLAP51003 745 aaKnown RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 UBASH3AP57075 661 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 INSM1Q01101 510 aaPredicted RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 MTM1Q13496 603 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 NR1I3Q14994 352 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 CYTH1Q15438 398 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 NR0B2Q15466 257 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 DPYSL2Q16555 572 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 FAXCQ5TGI0 409 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 LVRNQ6Q4G3 990 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 SRLQ86TD4 932 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 PHACTR4Q8IZ21 702 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 NDUFAF2Q8N183 169 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 OR6C4Q8NGE1 309 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 MAPK15Q8TD08 544 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 LMX1AQ8TE12 382 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 CELF6Q96J87 481 aaKnown RBP11.35□□□□□ -0.59
ACTN4-209ENST00000586538 EXOC2Q96KP1 924 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 SLC39A8Q9C0K1 460 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 UCKL1Q9NWZ5 548 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 MYO1AQ9UBC5 1043 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 LHX3Q9UBR4 397 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 ITM2BQ9Y287 266 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.35□□□□□ -0.599e-9■■■□□ 15.9
ACTN4-209ENST00000586538 DOCK9Q9BZ29 2069 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 CFAP47Q6ZTR5 3102 aa11.35□□□□□ -0.59
ACTN4-209ENST00000586538 FREM2Q5SZK8 3169 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 ACACAQ13085 2346 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 PDE2AO00408 941 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 DDX3XO00571 662 aaKnown RBP eCLIP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 TCEA3O75764 348 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 RASGRP1O95267 797 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 PIGNO95427 931 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 ELFN1P0C7U0 828 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 C6P13671 934 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 CTSEP14091 401 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 TIMP2P16035 220 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 IGFALSP35858 605 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 ZBED6P86452 979 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 PEX6Q13608 980 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 LBRQ14739 615 aaKnown RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 IQCB1Q15051 598 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 PRRT3Q5FWE3 981 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 C6orf132Q5T0Z8 1188 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 AFMIDQ63HM1 303 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 ATPAF2Q8N5M1 289 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 NIPA2Q8N8Q9 360 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 TP53I13Q8NBR0 393 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 IFI44Q8TCB0 444 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 PSKH2Q96QS6 385 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 KCTD15Q96SI1 283 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 WRAP53Q9BUR4 548 aaKnown RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 MAGEB5Q9BZ81 275 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 GPATCH2LQ9NWQ4 482 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
ACTN4-209ENST00000586538 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
ACTN4-209ENST00000586538 LUC7L2Q9Y383 392 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms