RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GLDCP23378 1020 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 PRKCHP24723 683 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 HLA-FP30511 346 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 CD70P32970 193 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SPRP35270 261 aaPredicted RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 GP5P40197 560 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 EIF2DP41214 584 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 VIPR2P41587 438 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 CSNK1DP48730 415 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 NUMBP49757 651 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KPNA2P52292 529 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 PRSS12P56730 875 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 GPX6P59796 221 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 RPL26P61254 145 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 MAGOHP61326 146 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 POLR2LP62875 67 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 CRADDP78560 199 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SKOR1P84550 965 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ZXDBP98169 803 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KDSRQ06136 332 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ADAM15Q13444 863 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 FRG1Q14331 258 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 GALNT3Q14435 633 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 EML3Q32P44 896 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 FUT11Q495W5 492 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 FNDC3BQ53EP0 1204 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 TAF1BQ53T94 588 aaPredicted RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 TTMPQ5BVD1 217 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 FSCBQ5H9T9 825 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 AARS2Q5JTZ9 985 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 SIRPB2Q5JXA9 342 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 STEAP4Q687X5 459 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 MBLAC2Q68D91 279 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KIAA0930Q6ICG6 404 aaPredicted RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 MRNIPQ6NTE8 343 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 PKN3Q6P5Z2 889 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KDELC1Q6UW63 502 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KDM7AQ6ZMT4 941 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 USP45Q70EL2 814 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 DSG4Q86SJ6 1040 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SRLQ86TD4 932 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 TAX1BP1Q86VP1 789 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 TMEM25Q86YD3 366 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 MFSD6LQ8IWD5 586 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SUGP1Q8IWZ8 645 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 KLHDC8BQ8IXV7 354 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SRRM1Q8IYB3 904 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 APCDD1Q8J025 514 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 MPP5Q8N3R9 675 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SH2D3CQ8N5H7 860 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.24□□□□□ -1.41
LIG3-206ENST00000586058 NAT16Q8N8M0 369 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 WFDC5Q8TCV5 224 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ISG20Q96AZ6 181 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 ELSPBP1Q96BH3 223 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 MYEOVQ96EZ4 313 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 PPP1R16AQ96I34 528 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 CABS1Q96KC9 395 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 SIGLEC10Q96LC7 697 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ZSWIM3Q96MP5 696 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 CPNE1Q99829 537 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 TRMT61BQ9BVS5 477 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 OSBPL1AQ9BXW6 950 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 NSRP1Q9H0G5 558 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 CCDC68Q9H2F9 335 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 EPB41L4BQ9H329 900 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 TRABDQ9H4I3 376 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 EBF3Q9H4W6 596 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ZDHHC6Q9H6R6 413 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 BRD9Q9H8M2 597 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 ARNT2Q9HBZ2 717 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 KCNK9Q9NPC2 374 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 DYRK4Q9NR20 520 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 PIH1D1Q9NWS0 290 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
LIG3-206ENST00000586058 ZNF180Q9UJW8 692 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 RPL26L1Q9UNX3 145 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 SMG5Q9UPR3 1016 aaKnown RBP6.24□□□□□ -1.41
LIG3-206ENST00000586058 HS3ST2Q9Y278 367 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 RAI2Q9Y5P3 530 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 NFS1Q9Y697 457 aa6.24□□□□□ -1.41
LIG3-206ENST00000586058 FAM159BA6NKW6 160 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 C1QTNF3-AMACRE9PGA6 284 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 GFRA2O00451 464 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 STX7O15400 261 aaKnown RBP6.23□□□□□ -1.41
LIG3-206ENST00000586058 TBX10O75333 385 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 ZWINTO95229 277 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 PAPSS2O95340 614 aaPredicted RBP6.23□□□□□ -1.41
LIG3-206ENST00000586058 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
LIG3-206ENST00000586058 CYP2A6P11509 494 aaPredicted RBP6.23□□□□□ -1.41
LIG3-206ENST00000586058 NEFHP12036 1026 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 SRCP12931 536 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 BRAFP15056 766 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 TPH1P17752 444 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 LPOP22079 712 aaPredicted RBP6.23□□□□□ -1.41
LIG3-206ENST00000586058 GDI1P31150 447 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 ADRA1AP35348 466 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 GRIA1P42261 906 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 SERPINB8P50452 374 aa6.23□□□□□ -1.41
LIG3-206ENST00000586058 CSE1LP55060 971 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms