RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MYH1P12882 1939 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 LOXHD1Q8IVV2 1947 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 FANCMQ8IYD8 2048 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MYO1GB0I1T2 1018 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MATN2O00339 956 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MPHOSPH10O00566 681 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CES2O00748 559 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 KIAA0355O15063 1070 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TLR2O60603 784 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CBX6O95503 412 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 AMY1AP04745 511 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CFIP05156 583 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CLTBP09497 229 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SUPT20HL2P0C7V6 817 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 BTF3P20290 206 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 KLRK1P26718 216 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 POU1F1P28069 291 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GSTM2P28161 218 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GNA11P29992 359 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 APOBEC3AP31941 199 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TNNT3P45378 269 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ANXA11P50995 505 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 VAV2P52735 878 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TFCP2Q12800 502 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 LEXMQ3ZCV2 418 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HERC4Q5GLZ8 1057 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TTC22Q5TAA0 569 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 C12orf60Q5U649 245 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TAPT1Q6NXT6 567 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 Q6YL49 198 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 IKBIPQ70UQ0 350 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 G2E3Q7L622 706 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 DGLUCYQ7Z3D6 616 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PIM3Q86V86 326 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MAML2Q8IZL2 1156 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIML1Q8N9V2 468 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ANKRD52Q8NB46 1076 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TOR1AIP2Q8NFQ8 470 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 OR56A1Q8NGH5 318 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GABPB2Q8TAK5 448 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 WIPF2Q8TF74 440 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM171Q8WVE6 324 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 OSCP1Q8WVF1 389 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CCDC47Q96A33 483 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 FAR2Q96K12 515 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MRGPRX1Q96LB2 322 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TRIB1Q96RU8 372 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 THUMPD2Q9BTF0 503 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 FSD1Q9BTV5 496 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MXD3Q9BW11 206 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SPZ1Q9BXG8 430 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RAB34Q9BZG1 259 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 DPH1Q9BZG8 443 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 INTS2Q9H0H0 1204 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 IGSF9Q9P2J2 1179 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RAB21Q9UL25 225 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ATP6V1DQ9Y5K8 247 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SALL3Q9BXA9 1300 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A087X0M5 115 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CENPVL1A0A0U1RR11 272 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 A0A1B0GX30 115 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 OR2W5A6NFC9 320 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MATN4O95460 622 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MCM5P33992 734 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HOXD12P35452 270 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GRIA3P42263 894 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ABCG1P45844 678 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CAPZA2P47755 286 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GATMP50440 423 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TPTEP56180 551 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 BACE1P56817 501 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RPS3AP61247 264 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 AKAP17AQ02040 695 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.01□□□□□ -2.092e-6■□□□□ 8.4
SMCHD1-211ENST00000584897 RUNX2Q13950 521 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 UBXN2BQ14CS0 331 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RASA2Q15283 850 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CERCAMQ5T4B2 595 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TMTC4Q5T4D3 741 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 PLAG1Q6DJT9 500 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 RGS7BPQ6MZT1 257 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MIS18BP1Q6P0N0 1132 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM108Q6UXF1 575 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 C1orf122Q6ZSJ8 110 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MFSD6Q6ZSS7 791 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 VSIG1Q86XK7 387 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 KIAA2013Q8IYS2 634 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 GPRC5AQ8NFJ5 357 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SPPL3Q8TCT6 385 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 OTUD7AQ8TE49 926 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 SNX19Q92543 992 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TMEM125Q96AQ2 219 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 HS6ST2Q96MM7 605 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MEIS3Q99687 375 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 VCPKMTQ9H867 229 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 MAGEF1Q9HAY2 307 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 CPNE5Q9HCH3 593 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ANKEF1Q9NU02 776 aa2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 ARGLU1Q9NWB6 273 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-211ENST00000584897 TAS2R10Q9NYW0 307 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms