RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
SRSF1-206ENST00000583741 LY6DQ14210 128 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 DEFB133Q30KQ1 61 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 IGF2-ASQ6U949 168 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 CRTC1Q6UUV9 634 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 MCOLN2Q8IZK6 566 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 MSANTD4Q8NCY6 345 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 TTC9Q92623 222 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 ZNF653Q96CK0 615 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 C11orf70Q9BRQ4 267 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 SPON2Q9BUD6 331 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 EVA1BQ9NVM1 165 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 RRN3Q9NYV6 651 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 ADAM22Q9P0K1 906 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 STAP1Q9ULZ2 295 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 SSUH2Q9Y2M2 353 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 ACTL7AQ9Y615 435 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 DUSP10Q9Y6W6 482 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 CHD5Q8TDI0 1954 aa20.79■□□□□ 0.92
SRSF1-206ENST00000583741 CAPN8A6NHC0 703 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 BTNL10A8MVZ5 291 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 AQP9O43315 295 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 MYBL1P10243 752 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 CCNHP51946 323 aaPredicted RBP20.78■□□□□ 0.92
SRSF1-206ENST00000583741 ARF5P84085 180 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 SKOR1P84550 965 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 DEUP1Q05D60 604 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 PDE1CQ14123 709 aaPredicted RBP20.78■□□□□ 0.92
SRSF1-206ENST00000583741 LRRC31Q6UY01 552 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 EFL1Q7Z2Z2 1120 aaKnown RBP20.78■□□□□ 0.92
SRSF1-206ENST00000583741 SNRNP27Q8WVK2 155 aaKnown RBP20.78■□□□□ 0.92
SRSF1-206ENST00000583741 FEM1CQ96JP0 617 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 C1orf74Q96LT6 269 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 HEPHQ9BQS7 1158 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 DPH1Q9BZG8 443 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 ATP13A1Q9HD20 1204 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 GGT7Q9UJ14 662 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 FCF1Q9Y324 198 aaKnown RBP20.78■□□□□ 0.92
SRSF1-206ENST00000583741 ENTPD2Q9Y5L3 495 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 CSNK1G3Q9Y6M4 447 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 HECTD1Q9ULT8 2610 aa20.78■□□□□ 0.92
SRSF1-206ENST00000583741 ILVBLA1L0T0 632 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 MACROD2A1Z1Q3 448 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 H3BM21 787 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 AP1G1O43747 822 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 CALB1P05937 261 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 JUNDP17535 347 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 RABIFP47224 123 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 DNA2P51530 1060 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 VAC14Q08AM6 782 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 EIF2B5Q13144 721 aaKnown RBP20.77■□□□□ 0.92
SRSF1-206ENST00000583741 RETSATQ6NUM9 610 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 ZDHHC17Q8IUH5 632 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 RBFAQ8N0V3 343 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 PCDH20Q8N6Y1 951 aaKnown RBP20.77■□□□□ 0.92
SRSF1-206ENST00000583741 LMX1AQ8TE12 382 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 ARHGEF26Q96DR7 871 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 PRR11Q96HE9 360 aaPredicted RBP20.77■□□□□ 0.92
SRSF1-206ENST00000583741 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.92
SRSF1-206ENST00000583741 SLC46A1Q96NT5 459 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 C1QTNF2Q9BXJ5 285 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 CEP44Q9C0F1 390 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 MYO1AQ9UBC5 1043 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 ITM2BQ9Y287 266 aa20.77■□□□□ 0.92
SRSF1-206ENST00000583741 A0A0A6YYK5 440 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 EME2A4GXA9 379 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 IGLON5A6NGN9 336 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 ATMINO43313 823 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 SRGAP2O75044 1071 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 CD160O95971 181 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 FLT3P36888 993 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 ABL2P42684 1182 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 SNX16P57768 344 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 PTP4A2Q12974 167 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 SLC25A52Q3SY17 297 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 C2CD6Q53TS8 623 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 CARD16Q5EG05 197 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 PERM1Q5SV97 790 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 TRNP1Q6NT89 227 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 NYAP1Q6ZVC0 841 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 TM6SF2Q9BZW4 377 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 TCEAL2Q9H3H9 227 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 ZDHHC6Q9H6R6 413 aa20.76■□□□□ 0.91
SRSF1-206ENST00000583741 CNOT8Q9UFF9 292 aaKnown RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 IPO11Q9UI26 975 aaKnown RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 PNMA8BQ9ULN7 279 aaPredicted RBP20.76■□□□□ 0.91
SRSF1-206ENST00000583741 FPGTO14772 594 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 KIF5CO60282 957 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 F9P00740 461 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 RBMS1P29558 406 aaKnown RBP20.75■□□□□ 0.91
SRSF1-206ENST00000583741 GKP32189 559 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 PDX1P52945 283 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 ZNF783Q6ZMS7 281 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 RHOT2Q8IXI1 618 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 RNF10Q8N5U6 811 aaKnown RBP20.75■□□□□ 0.91
SRSF1-206ENST00000583741 OR6K2Q8NGY2 324 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 VOPP1Q96AW1 172 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 LENG8Q96PV6 779 aaPredicted RBP20.75■□□□□ 0.91
SRSF1-206ENST00000583741 NCKIPSDQ9NZQ3 722 aa20.75■□□□□ 0.91
SRSF1-206ENST00000583741 SALL4Q9UJQ4 1053 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms