RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SATB2Q9UPW6 733 aa10.73□□□□□ -0.69
RFFL-209ENST00000581265 TMEM110-MUSTN1A8MSY1 372 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 WASH4PA8MWX3 477 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 MUSKO15146 869 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 EPHB6O15197 1021 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 KLK10O43240 276 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 GJB6O95452 261 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 IGSF6O95976 241 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 ANXA6P08133 673 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 KRT10P13645 584 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 TSHRP16473 764 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 ITIH2P19823 946 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 GPD1P21695 349 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 EPHB2P29323 1055 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 IGFALSP35858 605 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 STAT1P42224 750 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
RFFL-209ENST00000581265 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
RFFL-209ENST00000581265 KLK7P49862 253 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 BLKP51451 505 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 PPARDQ03181 441 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 C1orf61Q13536 156 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 KRT31Q15323 416 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 KLHL40Q2TBA0 621 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 TMEM52BQ4KMG9 183 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 PERM1Q5SV97 790 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 FAXCQ5TGI0 409 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 CDKAL1Q5VV42 579 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 LVRNQ6Q4G3 990 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 MACC1Q6ZN28 852 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 UMODL1-AS1Q8N2C9 162 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 SDR16C5Q8N3Y7 309 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 TP53I13Q8NBR0 393 aaPredicted RBP10.72□□□□□ -0.69
RFFL-209ENST00000581265 C3orf20Q8ND61 904 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 VCPIP1Q96JH7 1222 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 KLC2Q9H0B6 622 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 NUP62CLQ9H1M0 184 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 NLRC4Q9NPP4 1024 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 CHMP5Q9NZZ3 219 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 PADI4Q9UM07 663 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 SIK3Q9Y2K2 1263 aa10.72□□□□□ -0.69
RFFL-209ENST00000581265 TCRBV5S1A1TA0A578 114 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 CDRT15L2A8MXV6 281 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 RASA4BC9J798 803 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 RASA4O43374 803 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 CALB1P05937 261 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 ZNF143P52747 638 aaPredicted RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 HK3P52790 923 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 AIF1P55008 147 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 RHOAP61586 193 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 ELP6Q0PNE2 266 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 NFATC3Q12968 1075 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 SERINC3Q13530 473 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 GRM3Q14832 879 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 LRRC14Q15048 493 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 AGERQ15109 404 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 CYTH1Q15438 398 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 UGP2Q16851 508 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 CLEC16AQ2KHT3 1053 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 WSCD2Q2TBF2 565 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 PARP15Q460N3 678 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 C3orf38Q5JPI3 329 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 EFHC2Q5JST6 749 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 LRRC73Q5JTD7 316 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 FKBP15Q5T1M5 1219 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 ESRP1Q6NXG1 681 aaKnown RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 CRTC1Q6UUV9 634 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 ZNF574Q6ZN55 896 aaPredicted RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 FSTL5Q8N475 847 aaPredicted RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 ARL14Q8N4G2 192 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 WDR36Q8NI36 951 aaKnown RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 CXorf40AQ8TE69 158 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 SCG3Q8WXD2 468 aaKnown RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 AHCTF1Q8WYP5 2266 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 HMCESQ96FZ2 354 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 EPAS1Q99814 870 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 WRAP53Q9BUR4 548 aaKnown RBP10.71□□□□□ -0.69
RFFL-209ENST00000581265 SELENOOQ9BVL4 669 aa10.71□□□□□ -0.69
RFFL-209ENST00000581265 TSPAN11A1L157 253 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 NTN3O00634 580 aaPredicted RBP10.7□□□□□ -0.7
RFFL-209ENST00000581265 INSIG1O15503 277 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 TPM2P07951 284 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 ALPIP09923 528 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 PDX1P52945 283 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 IRF4Q15306 451 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 ELOCQ15369 112 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 SCYL2Q6P3W7 929 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 MON1BQ7L1V2 547 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 CLEC14AQ86T13 490 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 ZNF354CQ86Y25 554 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 NETO2Q8NC67 525 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 TTC9Q92623 222 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 ZNF641Q96N77 438 aaPredicted RBP10.7□□□□□ -0.7
RFFL-209ENST00000581265 CCDC3Q9BQI4 270 aa10.7□□□□□ -0.7
RFFL-209ENST00000581265 CNPY3Q9BT09 278 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms