RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 PABPC3Q9H361 631 aaKnown RBP4.92□□□□□ -1.62
CNOT1-219ENST00000569882 MTG2Q9H4K7 406 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 ZDHHC6Q9H6R6 413 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 SP110Q9HB58 689 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 SGK2Q9HBY8 427 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 NPHS2Q9NP85 383 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 ITM2CQ9NQX7 267 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 AIPL1Q9NZN9 384 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 CTTNBP2NLQ9P2B4 639 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 PPARGC1AQ9UBK2 798 aaKnown RBP4.92□□□□□ -1.62
CNOT1-219ENST00000569882 IP6K2Q9UHH9 426 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
CNOT1-219ENST00000569882 SLCO3A1Q9UIG8 710 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 ANAPC7Q9UJX3 599 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 TMEM59LQ9UK28 342 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 CAPN11Q9UMQ6 739 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 AP4E1Q9UPM8 1137 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 GPR179Q6PRD1 2367 aa4.92□□□□□ -1.62
CNOT1-219ENST00000569882 SHROOM3Q8TF72 1996 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 A0A0D9SEW6 157 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 A0A1B0GTW7 788 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 LNP1A1A4G5 178 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ILVBLA1L0T0 632 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ARHGAP42A6NI28 874 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 C4orf47A7E2U8 309 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PATE3B3GLJ2 98 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 EIF3CLB5ME19 914 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 AKR1B15C9JRZ8 316 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ALOX15BO15296 676 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SNAP91O60641 907 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 IGSF6O95976 241 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SERPINF2P08697 491 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 H2AFZP0C0S5 128 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 GOT1P17174 413 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ENGP17813 658 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 L1CAMP32004 1257 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ACSL1P33121 698 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 HTR7P34969 479 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SERPINB6P35237 376 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PRKCIP41743 596 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SERPINH1P50454 418 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 NOVA1P51513 510 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PLK1P53350 603 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 COPAP53621 1224 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 HDAC4P56524 1084 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 GSCP56915 257 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 RHOAP61586 193 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 RPL7AP62424 266 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 IRX4P78413 519 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SLC20A2Q08357 652 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 MAMLD1Q13495 774 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PIGHQ14442 188 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SPA17Q15506 151 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SMTNL2Q2TAL5 461 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 INAVAQ3KP66 663 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PPM1JQ5JR12 505 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 EXOSC6Q5RKV6 272 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ERMARDQ5T6L9 678 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 DPY19L2P1Q6NXN4 242 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 C22orf39Q6P5X5 142 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ALKBH5Q6P6C2 394 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 USP30Q70CQ3 517 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 H2AFVQ71UI9 128 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ERMP1Q7Z2K6 904 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 IRF2BP2Q7Z5L9 587 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PRPF39Q86UA1 669 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SH2D3CQ8N5H7 860 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PCDH20Q8N6Y1 951 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CCDC185Q8N715 623 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 RTL3Q8N8U3 475 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 C2CD4AQ8NCU7 369 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CADM4Q8NFZ8 388 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 OR8K1Q8NGG5 319 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 OR2T34Q8NGX1 318 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PIP4K2CQ8TBX8 421 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ZNF564Q8TBZ8 553 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SETD7Q8WTS6 366 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 NT5C3BQ969T7 300 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 NTAN1Q96AB6 310 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 MYEOVQ96EZ4 313 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 SERAC1Q96JX3 654 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 GDAP1L1Q96MZ0 367 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ZNF830Q96NB3 372 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 FAM129BQ96TA1 746 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 EIF3CQ99613 913 aaKnown RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 NUP85Q9BW27 656 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CINPQ9BW66 212 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CALN1Q9BXU9 219 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 ZDHHC5Q9C0B5 715 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 THAP2Q9H0W7 228 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 OSBPL2Q9H1P3 480 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 PCED1AQ9H1Q7 454 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 RSPH9Q9H1X1 276 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 MAGEH1Q9H213 219 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 TNKS2Q9H2K2 1166 aa4.91□□□□□ -1.62
CNOT1-219ENST00000569882 CLEC4MQ9H2X3 399 aaPredicted RBP4.91□□□□□ -1.62
CNOT1-219ENST00000569882 RETREG1Q9H6L5 497 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms