RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CD1EP15812 388 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 YIF1BQ5BJH7 314 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MBLAC2Q68D91 279 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 BRINP3Q76B58 766 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ZC3H7AQ8IWR0 971 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 MCOLN2Q8IZK6 566 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 FAM47BQ8NA70 645 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SLC22A8Q8TCC7 542 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ST6GAL2Q96JF0 529 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 IL12RB2Q99665 862 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RIOX1Q9H6W3 641 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 POPDC2Q9HBU9 364 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TNPO2O14787 897 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 CDC40O60508 579 aaKnown RBP eCLIP2.94□□□□□ -1.94
CHD9-218ENST00000566029 KCNJ13O60928 360 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SERPIND1P05546 499 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ITGB6P18564 788 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 IMPDH1P20839 514 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 DNAJB2P25686 324 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 FAM189A2Q15884 450 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TATDN3Q17R31 274 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ZIK1Q3SY52 487 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 KANK2Q63ZY3 851 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 IQSEC1Q6DN90 963 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 OTOP3Q7RTS5 596 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SLC9A9Q8IVB4 645 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MAGEB6Q8N7X4 407 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RHOXF1Q8NHV9 184 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 GAL3ST3Q96A11 431 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SLC39A13Q96H72 371 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RIPOR3Q96MK2 946 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 BCL7BQ9BQE9 202 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 BBS2Q9BXC9 721 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 METTL8Q9H825 291 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 TOR4AQ9NXH8 423 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SUCOQ9UBS9 1254 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 RFPL2O75678 378 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 KCNK2O95069 426 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 GABARAPO95166 117 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 IL18RAPO95256 599 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 KCNH1O95259 989 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 EPB42P16452 691 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 CYP3A5P20815 502 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NMT1P30419 496 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 PSMC2P35998 433 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 NUP62P37198 522 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 FEN1P39748 380 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 IST1P53990 364 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 NAPAP54920 295 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MYL7Q01449 175 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MMRN1Q13201 1228 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SMU1Q2TAY7 513 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 METTL2BQ6P1Q9 378 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 ADGRF2Q8IZF7 708 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 ZFP90Q8TF47 636 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 OTUB1Q96FW1 271 aaPredicted RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 MAP6Q96JE9 813 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 TMEM246Q9BRR3 403 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 MKRN2Q9H000 416 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 EIF2B3Q9NR50 452 aaKnown RBP2.94□□□□□ -1.94
CHD9-218ENST00000566029 FBXO8Q9NRD0 319 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SEPT3Q9UH03 358 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 SARDHQ9UL12 918 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 RIPK3Q9Y572 518 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 PSAT1Q9Y617 370 aa2.94□□□□□ -1.94
CHD9-218ENST00000566029 HMX2A2RU54 273 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MYO1DO94832 1006 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CCNDBP1O95273 360 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CD63P08962 238 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TRAPPC2P0DI81 140 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TRAPPC2BP0DI82 140 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 IDH3AP50213 366 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ARSEP51690 589 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 GPS1Q13098 491 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PGS1Q32NB8 556 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MTX3Q5HYI7 312 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TRAPPC3LQ5T215 181 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PLA2G4FQ68DD2 849 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PLEKHA7Q6IQ23 1121 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 COMTD1Q86VU5 262 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CBR4Q8N4T8 237 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RNF148Q8N7C7 305 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 POMGNT2Q8NAT1 580 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 HEXDCQ8WVB3 486 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LPGAT1Q92604 370 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PSKH2Q96QS6 385 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CALN1Q9BXU9 219 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FRMD8P1Q9BZ68 369 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 SLA2Q9H6Q3 261 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 WDR55Q9H6Y2 383 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 WDR41Q9HAD4 459 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ACOXLQ9NUZ1 547 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FBXL12Q9NXK8 326 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 UGT2A1Q9Y4X1 527 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CXorf49A8MYA2 514 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 CTDSP2O14595 271 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TNNC2P02585 160 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SPATA31C1P0DKV0 1188 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RPS2P15880 293 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 ITGALP20701 1170 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms