RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MIPP30301 263 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 KCTD16Q68DU8 428 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 CAMK1DQ8IU85 385 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 PHACTR4Q8IZ21 702 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 ARHGEF26Q96DR7 871 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 CLPBQ9H078 707 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 CSNK1G3Q9Y6M4 447 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 A0A1B0GTH6 734 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 NEMP2A6NFY4 417 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 H3BM21 787 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 MUSKO15146 869 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 FTLP02792 175 aaPredicted RBP23.97■■□□□ 1.43
RAB40C-209ENST00000565511 CCDC172P0C7W6 258 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 SKILP12757 684 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 TCF4P15884 667 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 PRKCIP41743 596 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 NDST2P52849 883 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 RAD51Q06609 339 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 WSCD2Q2TBF2 565 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 ZCCHC8Q6NZY4 707 aaKnown RBP23.97■■□□□ 1.43
RAB40C-209ENST00000565511 CRTC1Q6UUV9 634 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 RFX8Q6ZV50 586 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 TSEN2Q8NCE0 465 aaKnown RBP23.97■■□□□ 1.43
RAB40C-209ENST00000565511 NCAPGQ9BPX3 1015 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 FUCA2Q9BTY2 467 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 DUSP23Q9BVJ7 150 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 SUV39H2Q9H5I1 410 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 AIPL1Q9NZN9 384 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 APOBEC3BQ9UH17 382 aaKnown RBP23.97■■□□□ 1.43
RAB40C-209ENST00000565511 RAI2Q9Y5P3 530 aa23.97■■□□□ 1.43
RAB40C-209ENST00000565511 A0A1W2PNU3 283 aaPredicted RBP23.96■■□□□ 1.43
RAB40C-209ENST00000565511 LRCH4O75427 683 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 C6P13671 934 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 ERCC2P18074 760 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 TGM2P21980 687 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 HTR7P34969 479 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 ABCG1P45844 678 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 IQCB1Q15051 598 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 TCEA2Q15560 299 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 PERM1Q5SV97 790 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 ERMARDQ5T6L9 678 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 CAVIN1Q6NZI2 390 aaKnown RBP23.96■■□□□ 1.43
RAB40C-209ENST00000565511 EFL1Q7Z2Z2 1120 aaKnown RBP23.96■■□□□ 1.43
RAB40C-209ENST00000565511 SLC35F3Q8IY50 421 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 SNIP1Q8TAD8 396 aaKnown RBP23.96■■□□□ 1.43
RAB40C-209ENST00000565511 ZNF653Q96CK0 615 aa23.96■■□□□ 1.43
RAB40C-209ENST00000565511 CNOT8Q9UFF9 292 aaKnown RBP23.96■■□□□ 1.43
RAB40C-209ENST00000565511 SHROOM3Q8TF72 1996 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 CPED1A4D0V7 1026 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 RIOK3O14730 519 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 CSO75390 466 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 MPOP05164 745 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 GP1BAP07359 652 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 IL1R2P27930 398 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 EIF4A3P38919 411 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 MMP12P39900 470 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 THOP1P52888 689 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 ADKP55263 362 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 UGP2Q16851 508 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 PRRT3Q5FWE3 981 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 PPP6R3Q5H9R7 873 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 MACC1Q6ZN28 852 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 MAPK15Q8TD08 544 aa23.95■■□□□ 1.42
RAB40C-209ENST00000565511 NAT10Q9H0A0 1025 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 CWC15Q9P013 229 aaKnown RBP23.95■■□□□ 1.42
RAB40C-209ENST00000565511 A0A1W2PQC6 194 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 YPEL5P62699 121 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 RALGDSQ12967 914 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 DPYSQ14117 519 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 TBC1D25Q3MII6 688 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 SRLQ86TD4 932 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 FUBP1Q96AE4 644 aaKnown RBP23.94■■□□□ 1.42
RAB40C-209ENST00000565511 BOCQ9BWV1 1114 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 USP29Q9HBJ7 922 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 ETNK2Q9NVF9 386 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 SPASTQ9UBP0 616 aa23.94■■□□□ 1.42
RAB40C-209ENST00000565511 TTC24A2A3L6 582 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-209ENST00000565511 PMS2P1A4D2B8 440 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 ARHGAP42A6NI28 874 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 DFFAO00273 331 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 GZMAP12544 262 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 TSHRP16473 764 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 GM2AP17900 193 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 XPAP23025 273 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-209ENST00000565511 ZNF165P49910 485 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 LIG3P49916 1009 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 DUSP3P51452 185 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-209ENST00000565511 KLHL30Q0D2K2 578 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 ELP6Q0PNE2 266 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 ALG11Q2TAA5 492 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 PLA2G15Q8NCC3 412 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 FNIP1Q8TF40 1166 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 TSACCQ96A04 125 aaPredicted RBP23.93■■□□□ 1.42
RAB40C-209ENST00000565511 MYO1AQ9UBC5 1043 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 SALL4Q9UJQ4 1053 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 ATP8A1Q9Y2Q0 1164 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 OR1A2Q9Y585 309 aa23.93■■□□□ 1.42
RAB40C-209ENST00000565511 EME2A4GXA9 379 aaPredicted RBP23.92■■□□□ 1.42
RAB40C-209ENST00000565511 SMTNL1A8MU46 457 aa23.92■■□□□ 1.42
RAB40C-209ENST00000565511 TPP1O14773 563 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms