RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLN6-205ENST00000564846 MARK1Q9P0L2 795 aa19.71■□□□□ 0.75
CLN6-205ENST00000564846 INTS6Q9UL03 887 aaKnown RBP19.71■□□□□ 0.75
CLN6-205ENST00000564846 ERICH4A6NGS2 130 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 TPP1O14773 563 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 LDB2O43679 373 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 VIMP08670 466 aaKnown RBP19.7■□□□□ 0.74
CLN6-205ENST00000564846 DRD4P21917 467 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 HLA-FP30511 346 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 HADHAP40939 763 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 DMTNQ08495 405 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PITRM1Q5JRX3 1037 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 ADGRG2Q8IZP9 1017 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 NDUFAF2Q8N183 169 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 VN1R2Q8NFZ6 395 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 OR13J1Q8NGT2 312 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 CALML6Q8TD86 181 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 RMDN1Q96DB5 314 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 FAM107BQ9H098 131 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PCMTD2Q9NV79 361 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 SLC17A7Q9P2U7 560 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 TCP11X1B4DZS4 312 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 SLC7A4O43246 635 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PRLP01236 227 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 CRHR1P34998 444 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 ETV4P43268 484 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 MAPK8P45983 427 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 CSNK1DP48730 415 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 SERPINB8P50452 374 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 ACVR1Q04771 509 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PDK4Q16654 411 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 FSTL4Q6MZW2 842 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 NEPROQ6NW34 567 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 SRLQ86TD4 932 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 LMNTD2Q8IXW0 634 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 ATP2A3Q93084 1043 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 NSRP1Q9H0G5 558 aaKnown RBP19.7■□□□□ 0.74
CLN6-205ENST00000564846 VPS11Q9H270 941 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 RHOJQ9H4E5 214 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PLLPQ9Y342 182 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 PCDHGC4Q9Y5F7 938 aa19.7■□□□□ 0.74
CLN6-205ENST00000564846 EPOPA6NHQ4 379 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 K7ERQ8 282 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 CRTAMO95727 393 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 TYRP14679 529 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 TYK2P29597 1187 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 DMC1Q14565 340 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 LY6G5CQ5SRR4 150 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 RGS9BPQ6ZS82 235 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 KIAA0408Q6ZU52 694 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 ZC3HC1Q86WB0 502 aaKnown RBP19.69■□□□□ 0.74
CLN6-205ENST00000564846 LRRC34Q8IZ02 419 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 DCLK2Q8N568 766 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 SPOCK2Q92563 424 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 MRPL38Q96DV4 380 aaKnown RBP19.69■□□□□ 0.74
CLN6-205ENST00000564846 VPS39Q96JC1 886 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 SLC13A1Q9BZW2 595 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 GGA2Q9UJY4 613 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 WNT6Q9Y6F9 365 aa19.69■□□□□ 0.74
CLN6-205ENST00000564846 DHRS4L1P0CG22 281 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 MAGEA12P43365 314 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 TRAF2Q12933 501 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 FUT11Q495W5 492 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 CDHR3Q6ZTQ4 885 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 C2CD4AQ8NCU7 369 aaPredicted RBP19.68■□□□□ 0.74
CLN6-205ENST00000564846 LPCAT1Q8NF37 534 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 STYXQ8WUJ0 223 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 CABS1Q96KC9 395 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 SLC2A11Q9BYW1 496 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 DCDC2Q9UHG0 476 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 GGT7Q9UJ14 662 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 GRID1Q9ULK0 1009 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 HS3ST2Q9Y278 367 aa19.68■□□□□ 0.74
CLN6-205ENST00000564846 MTO1Q9Y2Z2 717 aaKnown RBP19.68■□□□□ 0.74
CLN6-205ENST00000564846 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 ANKRD66B4E2M5 251 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 SMAD6O43541 496 aaKnown RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 FZD6O60353 706 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 AHSGP02765 367 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 PDHA1P08559 390 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 PABPC1P11940 636 aaKnown RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 TAC1P20366 129 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 POLD2P49005 469 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 PRAMEP78395 509 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 SULT2A1Q06520 285 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 PDE1CQ14123 709 aaPredicted RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 ATXN7L2Q5T6C5 722 aaPredicted RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 ZNF470Q6ECI4 717 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 ISG20Q96AZ6 181 aaKnown RBP19.67■□□□□ 0.74
CLN6-205ENST00000564846 ATXN7L3BQ96GX2 97 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 FAM111AQ96PZ2 611 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 GPR22Q99680 433 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 MFSD1Q9H3U5 465 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 MYLKQ15746 1914 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 GLRA3O75311 464 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 IGSF6O95976 241 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 MPOP05164 745 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 FSHRP23945 695 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 FOXN2P32314 431 aa19.67■□□□□ 0.74
CLN6-205ENST00000564846 SLC1A2P43004 574 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms