RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CCDC117Q8IWD4 279 aaPredicted RBP7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF683Q8IZ20 524 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CMTM8Q8IZV2 173 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NDUFAF2Q8N183 169 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CNTD1Q8N815 330 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CCDC63Q8NA47 563 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 IPMKQ8NFU5 416 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RAB3IL1Q8TBN0 382 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF398Q8TD17 642 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PTCD2Q8WV60 388 aaKnown RBP7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC22A12Q96S37 553 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CYP2S1Q96SQ9 504 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 APOL2Q9BQE5 337 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TSSK1BQ9BXA7 367 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PLA2G2FQ9BZM2 168 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MANSC1Q9H8J5 431 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ABCF3Q9NUQ8 709 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RBM22Q9NW64 420 aaKnown RBP eCLIP7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SMPD4Q9NXE4 827 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 IPO11Q9UI26 975 aaKnown RBP7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FBXL21Q9UKT6 434 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PLLPQ9Y342 182 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 USH1CQ9Y6N9 552 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CAPN7Q9Y6W3 813 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TICRRQ7Z2Z1 1910 aa7.52□□□□□ -1.21
MAP1LC3B-205ENST00000564638 KMT2EQ8IZD2 1858 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZCWPW2A0A1B0GU75 182 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MED19A0JLT2 244 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF840PA6NDX5 716 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 F5H5T6 163 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TPP1O14773 563 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SCAMP3O14828 347 aaKnown RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 KLF11O14901 512 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BIRC5O15392 142 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TIMM44O43615 452 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RAMP2O60895 175 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ECI2O75521 394 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 DCTN3O75935 186 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 DNAJC8O75937 253 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 IL1BP01584 269 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ITGA2BP08514 1039 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ERVK-10P10266 1014 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PAMP19021 973 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TACR2P21452 398 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BGNP21810 368 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FCARP24071 287 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 GDI1P31150 447 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CRHR1P34998 444 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ATP5C1P36542 298 aaKnown RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HADHAP40939 763 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SCTRP47872 440 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RENBPP51606 427 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 LIMK2P53671 638 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 YBEYP58557 167 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZXDAP98168 799 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CCDC15Q0P6D6 951 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 UGP2Q16851 508 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PARP15Q460N3 678 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PCID2Q5JVF3 399 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RABGAP1LQ5R372 815 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CERCAMQ5T4B2 595 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PDPK2PQ6A1A2 396 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 FBXL22Q6P050 247 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CES3Q6UWW8 571 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 VITQ6UXI7 678 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ASCL5Q7RTU5 278 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 OTOAQ7RTW8 1153 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ERMP1Q7Z2K6 904 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TFAP2DQ7Z6R9 452 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 UNC5BQ8IZJ1 945 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC44A3Q8N4M1 653 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZNF276Q8N554 614 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 CELF5Q8N6W0 485 aaKnown RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ARMC2Q8NEN0 867 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PPP1R14CQ8TAE6 165 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 GABPB2Q8TAK5 448 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BPIFB1Q8TDL5 484 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 USP13Q92995 863 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 NXPE3Q969Y0 559 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 E2F7Q96AV8 911 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ELSPBP1Q96BH3 223 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RSPRY1Q96DX4 576 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 HMCESQ96FZ2 354 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RPRD1AQ96P16 312 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RBBP8Q99708 897 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 KIFC1Q9BW19 673 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TRIM55Q9BYV6 548 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC25A51Q9H1U9 297 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 RETREG1Q9H6L5 497 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 BRD9Q9H8M2 597 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 MRM3Q9HC36 420 aaKnown RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLCO1B3Q9NPD5 702 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 VPS45Q9NRW7 570 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 C20orf96Q9NUD7 363 aaPredicted RBP7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 TDP1Q9NUW8 608 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 UBP1Q9NZI7 540 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 SLC17A6Q9P2U8 582 aa7.51□□□□□ -1.21
MAP1LC3B-205ENST00000564638 ZMYM5Q9UJ78 669 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms