RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 SLC10A7Q0GE19 358 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 SGCGQ13326 291 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 TRIM14Q14142 442 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 SRLQ86TD4 932 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 LZTR1Q8N653 840 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 FAM71BQ8TC56 605 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 LENG8Q96PV6 779 aaPredicted RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 WRAP53Q9BUR4 548 aaKnown RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 CINPQ9BW66 212 aaPredicted RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 SCUBE2Q9NQ36 999 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
HERC2-206ENST00000564519 SPTLC3Q9NUV7 552 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 COQ6Q9Y2Z9 468 aa12.81□□□□□ -0.36
HERC2-206ENST00000564519 KNL1Q8NG31 2342 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 LAMA5O15230 3695 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 SSU72P8A0A1W2PR75 194 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 FAM149AA5PLN7 773 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 TRIM38O00635 465 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 ENC1O14682 589 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 FPGTO14772 594 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 PROSCO94903 275 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 LDOC1O95751 146 aaPredicted RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 H2AFZP0C0S5 128 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 GIMD1P0DJR0 217 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 HNF1BP35680 557 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 IGFALSP35858 605 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 CSNK1DP48730 415 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 CLDN6P56747 220 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 PFN3P60673 137 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 PDE1CQ14123 709 aaPredicted RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 FZD2Q14332 565 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 KRT81Q14533 505 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 LBRQ14739 615 aaKnown RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 UGP2Q16851 508 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 DHRS13Q6UX07 377 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 H2AFVQ71UI9 128 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 PGBD5Q8N414 524 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 HCAR2Q8TDS4 363 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 CXorf40AQ8TE69 158 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 ASB12Q8WXK4 309 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 CTNNBL1Q8WYA6 563 aaPredicted RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 CENPTQ96BT3 561 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 DEF6Q9H4E7 631 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 NHEJ1Q9H9Q4 299 aaPredicted RBP12.8□□□□□ -0.36
HERC2-206ENST00000564519 UVRAGQ9P2Y5 699 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 DKK4Q9UBT3 224 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 KLF15Q9UIH9 416 aa12.8□□□□□ -0.36
HERC2-206ENST00000564519 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 MFSD11O43934 449 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 AKR1B10O60218 316 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 MAFKO60675 156 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 PIAS2O75928 621 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 TM7SF2O76062 418 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 TMEM253P0C7T8 217 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 XPAP23025 273 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 DGKAP23743 735 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 RABIFP47224 123 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 ACADVLP49748 655 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 SCNN1BP51168 640 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 DPYSL3Q14195 570 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 RFTN1Q14699 578 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 TMCO4Q5TGY1 634 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 TP53I13Q8NBR0 393 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 ZNF641Q96N77 438 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 ZNF599Q96NL3 588 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 ZNHIT6Q9NWK9 470 aaKnown RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 DNAJC28Q9NX36 388 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 SEPT3Q9UH03 358 aa12.79□□□□□ -0.36
HERC2-206ENST00000564519 PNMA8BQ9ULN7 279 aaPredicted RBP12.79□□□□□ -0.36
HERC2-206ENST00000564519 BAHCC1Q9P281 2608 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 DOCK9Q9BZ29 2069 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
HERC2-206ENST00000564519 FFAR2O15552 330 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 SIGLEC6O43699 453 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 NEBLO76041 1014 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 CDK4P11802 303 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 MYF5P13349 255 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 C6P13671 934 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 JUPP14923 745 aa12.78□□□□□ -0.36
HERC2-206ENST00000564519 CR2P20023 1033 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms