RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GBP6Q6ZN66 633 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 ARCQ7LC44 396 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 TMEM35BQ8NCS4 154 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 OR6K2Q8NGY2 324 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 HCAR2Q8TDS4 363 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 TSACCQ96A04 125 aaPredicted RBP18.75■□□□□ 0.59
TPM1-226ENST00000560959 C18orf8Q96DM3 657 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 RBM15Q96T37 977 aaKnown RBP eCLIP18.75■□□□□ 0.59
TPM1-226ENST00000560959 CRACR2AQ9BSW2 395 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 TUBD1Q9UJT1 453 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 MFHAS1Q9Y4C4 1052 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 DGKBQ9Y6T7 804 aa18.75■□□□□ 0.59
TPM1-226ENST00000560959 GTPBP10A4D1E9 387 aaKnown RBP18.74■□□□□ 0.59
TPM1-226ENST00000560959 SLC9A1P19634 815 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 ITIH1P19827 911 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 BMP6P22004 513 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 ACVRL1P37023 503 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 BPIFB4P59827 614 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 SRP54P61011 504 aaKnown RBP18.74■□□□□ 0.59
TPM1-226ENST00000560959 NFATC4Q14934 902 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 IRF4Q15306 451 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 CERCAMQ5T4B2 595 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 TMEM164Q5U3C3 297 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 ENPP7Q6UWV6 458 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 ZFAND4Q86XD8 727 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 DRC7Q8IY82 874 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 HTR3CQ8WXA8 447 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 CASKIN2Q8WXE0 1202 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 USP7Q93009 1102 aa18.74■□□□□ 0.59
TPM1-226ENST00000560959 ZSCAN5CA6NGD5 496 aaPredicted RBP18.73■□□□□ 0.59
TPM1-226ENST00000560959 C9orf172C9J069 976 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 TNFP01375 233 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 GP1BBP13224 206 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 TIMP2P16035 220 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 RHOQP17081 205 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 CLCN1P35523 988 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 ELP6Q0PNE2 266 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 CLCA4Q14CN2 919 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 EXOC3L4Q17RC7 722 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 WSCD2Q2TBF2 565 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 MANEALQ5VSG8 457 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 VASH2Q86V25 355 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 NLRP14Q86W24 1093 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 SLITRK4Q8IW52 837 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 APOOQ9BUR5 198 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 TMEM248Q9NWD8 314 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 FOXJ2Q9P0K8 574 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 OR12D3Q9UGF7 316 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 DOCK4Q8N1I0 1966 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 FLNCQ14315 2725 aa18.73■□□□□ 0.59
TPM1-226ENST00000560959 KDELR3O43731 214 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 NUDT21O43809 227 aaKnown RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 WT1P19544 449 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 FLT3P36888 993 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 ETV5P41161 510 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 PAK1Q13153 545 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 CLPPQ16740 277 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 INO80DQ53TQ3 878 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 FAM102AQ5T9C2 384 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 SPRED1Q7Z699 444 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 SLC47A2Q86VL8 602 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 XYLT1Q86Y38 959 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 SLC12A9Q9BXP2 914 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 NDFIP2Q9NV92 336 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 AKAP7Q9P0M2 348 aaPredicted RBP18.72■□□□□ 0.59
TPM1-226ENST00000560959 KLQ9UEF7 1012 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 TMEM59LQ9UK28 342 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 RNF215Q9Y6U7 377 aa18.72■□□□□ 0.59
TPM1-226ENST00000560959 CLEC18AA5D8T8 446 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 STMND1H3BQB6 276 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 FOXN3O00409 490 aaPredicted RBP18.71■□□□□ 0.59
TPM1-226ENST00000560959 PON1P27169 355 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 CYP4F2P78329 520 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 INPP5AQ14642 412 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 BORAQ6PGQ7 559 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 CLEC18BQ6UXF7 455 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 RD3Q7Z3Z2 195 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 FAM131BQ86XD5 332 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 FAM71AQ8IYT1 594 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 Q8N9G6 341 aaPredicted RBP18.71■□□□□ 0.59
TPM1-226ENST00000560959 CLEC18CQ8NCF0 446 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 WDR92Q96MX6 357 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 WRAP53Q9BUR4 548 aaKnown RBP18.71■□□□□ 0.59
TPM1-226ENST00000560959 LRIT1Q9P2V4 623 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 SCN8AQ9UQD0 1980 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 DOPEY2Q9Y3R5 2298 aa18.71■□□□□ 0.59
TPM1-226ENST00000560959 RELNP78509 3460 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 RAMP2O60895 175 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 ADRA1BP35368 520 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 MAPK10P53779 464 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 STX17P56962 302 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 MTM1Q13496 603 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 SERINC3Q13530 473 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 ARHGEF7Q14155 803 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 HLTFQ14527 1009 aaKnown RBP eCLIP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms