RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LINC01387J3KSC0 135 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PFDN6O15212 129 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FKBP6O75344 327 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 HAUS5O94927 633 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 EPN2O95208 641 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FGGP02679 453 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 TFPTP0C1Z6 253 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM228BP0C875 321 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 SERPINB6P35237 376 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ALDH3A2P51648 485 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 GPC3P51654 580 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CTAG1AP78358 180 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ATP2C1P98194 919 aaPredicted RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 SUZ12Q15022 739 aaKnown RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 EXOC3L4Q17RC7 722 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CATSPEREQ5SY80 951 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PEX26Q7Z412 305 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 MARVELD2Q8N4S9 558 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 OR7G1Q8NGA0 311 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM172AQ8WUF8 416 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 GLG1Q92896 1179 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 KTI12Q96EK9 354 aaPredicted RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 GOLPH3Q9H4A6 298 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ARMC7Q9H6L4 198 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 VPS37BQ9H9H4 285 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 SLCO1B3Q9NPD5 702 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC38A7Q9NVC3 462 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 INTS10Q9NVR2 710 aaKnown RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 RSL24D1Q9UHA3 163 aaKnown RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 NR2E1Q9Y466 385 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 TIAM2Q8IVF5 1701 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM47DPA6NHR8 397 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PI4K2BG5E9Z4 385 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 SPAG7O75391 227 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 DEXIO95424 95 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 TTLL1O95922 423 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PLATP00750 562 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CD48P09326 243 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CHRNB1P11230 501 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CD40P25942 277 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 GPC1P35052 558 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 RFC1P35251 1148 aaPredicted RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ACADSBP45954 432 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PCYT1AP49585 367 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 AQP4P55087 323 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 NUP107P57740 925 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FOXC1Q12948 553 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 KRT81Q14533 505 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 MAN2A1Q16706 1144 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 HFEQ30201 348 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 USP41Q3LFD5 358 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 C6orf163Q5TEZ5 329 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 AAGABQ6PD74 315 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 DHDDSQ86SQ9 333 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 RHOT2Q8IXI1 618 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM20CQ8IXL6 584 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 CENPSQ8N2Z9 138 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 BORCS5Q969J3 196 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 HDAC10Q969S8 669 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 MTFMTQ96DP5 389 aaKnown RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 HES6Q96HZ4 224 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 FER1L6-AS2Q96M78 137 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 EHD1Q9H4M9 534 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ZNF696Q9H7X3 374 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 COPS7BQ9H9Q2 264 aaPredicted RBP6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 GPATCH2Q9NW75 528 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 LGALS13Q9UHV8 139 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 ABCB11O95342 1321 aa6.82□□□□□ -1.32
TSPAN3-209ENST00000560715 NID2Q14112 1375 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 COL4A1P02462 1669 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 H3BSA7 217 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 KMOO15229 486 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DENRO43583 198 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 ITM2AO43736 263 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 CIB2O75838 187 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 ITGBL1O95965 494 aaPredicted RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 CCDC159P0C7I6 412 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PPP1R2P41236 205 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 RPL21P46778 160 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 CDK9P50750 372 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 TGFB2P61812 414 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 PPP3CAQ08209 521 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 EIF2B5Q13144 721 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 LAPTM5Q13571 262 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 APOFQ13790 326 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 IRF3Q14653 427 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SPCS2Q15005 226 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 NFIL3Q16649 462 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 TRIM71Q2Q1W2 868 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SIGIRRQ6IA17 410 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 RWDD4Q6NW29 188 aaKnown RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 DCLK2Q8N568 766 aa6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 SYTL5Q8TDW5 730 aaPredicted RBP6.81□□□□□ -1.32
TSPAN3-209ENST00000560715 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms