RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 POU3F2P20265 443 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 NR1D1P20393 614 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 CMA1P23946 247 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 PRCPP42785 496 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 CXCR3P49682 368 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 PMS1P54277 932 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 OR1D5P58170 312 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 GCNT1Q02742 428 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 PDCLQ13371 301 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ARHGEF7Q14155 803 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 NFATC4Q14934 902 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 MEA1Q16626 185 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ARHGAP44Q17R89 818 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 C14orf28Q4W4Y0 310 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 FHL5Q5TD97 284 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ZNF783Q6ZMS7 281 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 RYBPQ8N488 228 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 FAM46DQ8NEK8 389 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 CXorf40AQ8TE69 158 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 FUBP1Q96AE4 644 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ISG20Q96AZ6 181 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ARHGEF26Q96DR7 871 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 C1orf74Q96LT6 269 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 CPXM1Q96SM3 734 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 PIGVQ9NUD9 493 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ARMCX3Q9UH62 379 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 DGKBQ9Y6T7 804 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
RABGGTA-217ENST00000560521 ANKRD17O75179 2603 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 LRBAP50851 2863 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 LOC101059948A0A1B0GTJ6 334 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 TRIM49BA6NDI0 452 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 KRIT1O00522 736 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 HGSO14964 777 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 RAD1O60671 282 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 SEMA7AO75326 666 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 KRT38O76015 456 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 F13A1P00488 732 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 PRKAR1AP10644 381 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 TIMP2P16035 220 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 GNLYP22749 145 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 COL8A1P27658 744 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 HTR1BP28222 390 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 OAS2P29728 719 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 FKBP3Q00688 224 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 GNA12Q03113 381 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 CDC20Q12834 499 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 INPP5AQ14642 412 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 LRRC14Q15048 493 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 WSCD2Q2TBF2 565 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 DEFB109BQ30KR1 87 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 MYLK3Q32MK0 819 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 AMZ1Q400G9 498 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 MAP9Q49MG5 647 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 TMEM52BQ4KMG9 183 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 CAPRIN2Q6IMN6 1127 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 FOXR2Q6PJQ5 311 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 LRRC31Q6UY01 552 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 FAM183BPQ6ZVS7 135 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 CCL4L1Q8NHW4 92 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 SSC4DQ8WTU2 575 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 ART4Q93070 314 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 PDXPQ96GD0 296 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 CCDC74BQ96LY2 380 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 WDR92Q96MX6 357 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 NPY6RQ99463 290 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 NUDT22Q9BRQ3 303 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 WRAP53Q9BUR4 548 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 C1QTNF7Q9BXJ2 289 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 SPRY4Q9C004 299 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 OCIAD1Q9NX40 245 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 AKAP7Q9P0M2 348 aaPredicted RBP9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 KLQ9UEF7 1012 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 PILRAQ9UKJ1 303 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 TP53TG5Q9Y2B4 290 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 OR1A2Q9Y585 309 aa9.03□□□□□ -0.96
RABGGTA-217ENST00000560521 C2CD3Q4AC94 2353 aa9.02□□□□□ -0.96
RABGGTA-217ENST00000560521 CCDC88CQ9P219 2028 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 FAM237AA0A1B0GTK4 181 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 TMEM202A6NGA9 273 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 B4DGG1 531 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 MED7O43513 233 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 DAB1O75553 588 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 POP4O95707 220 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 GSRP00390 522 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 PRKCGP05129 697 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms