RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RAI2Q9Y5P3 530 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 NUMBLQ9Y6R0 609 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 RPS6KL1Q9Y6S9 549 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 FAM169AQ9Y6X4 670 aa8.69□□□□□ -1.02
TRAF3-209ENST00000560463 ZFC3H1O60293 1989 aaKnown RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 TTC24A2A3L6 582 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 GRXCR2A6NFK2 248 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 OTOL1A6NHN0 477 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 HMGB1P1B2RPK0 211 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 WASH3PC4AMC7 463 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 H3BQ06 376 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 K7ERQ8 282 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ARNTLO00327 626 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 NPC1O15118 1278 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 FZD6O60353 706 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ATXN1LP0C7T5 689 aaKnown RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 FOSL2P15408 326 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 TPH1P17752 444 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PAMP19021 973 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 KCNA5P22460 613 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 NFKBIAP25963 317 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ATP5DP30049 168 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 OPRD1P41143 372 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 RECQLP46063 649 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 GRIA4P48058 902 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 SLC6A11P48066 632 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 STK19P49842 368 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CRADDP78560 199 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 MSLNQ13421 630 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 MTM1Q13496 603 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 IHHQ14623 411 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 POU6F1Q14863 301 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CRYMQ14894 314 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 LONRF1Q17RB8 773 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 MYLK3Q32MK0 819 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PUS10Q3MIT2 529 aaKnown RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 KBTBD12Q3ZCT8 623 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ACCSLQ4AC99 568 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ANKRD20A4Q4UJ75 823 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CARD16Q5EG05 197 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 DGKKQ5KSL6 1271 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PKN3Q6P5Z2 889 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ADGRD1Q6QNK2 874 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 KDELC2Q7Z4H8 507 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 C12orf40Q86WS4 652 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 LRRC6Q86X45 466 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 NDUFAF2Q8N183 169 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 KRT222Q8N1A0 295 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PHTF2Q8N3S3 785 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 SLC25A41Q8N5S1 370 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 GABPB2Q8TAK5 448 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 UHMK1Q8TAS1 419 aaKnown RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 MYLIPQ8WY64 445 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 HLA-CQ95604 372 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 RMDN1Q96DB5 314 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 LRIG1Q96JA1 1093 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 MRGPRX3Q96LB0 322 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ATP6V1G3Q96LB4 118 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 ZNF641Q96N77 438 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 C19orf43Q9BQ61 176 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PHF7Q9BWX1 381 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CIPCQ9C0C6 399 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 TRABDQ9H4I3 376 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 CHRAC1Q9NRG0 131 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PIH1D1Q9NWS0 290 aaKnown RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 NSMCE4AQ9NXX6 385 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 GTSE1Q9NYZ3 720 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PSMC3IPQ9P2W1 217 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 HECAQ9UBI9 543 aaPredicted RBP8.68□□□□□ -1.02
TRAF3-209ENST00000560463 SLCO3A1Q9UIG8 710 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 FAM50BQ9Y247 325 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 PCDHGC4Q9Y5F7 938 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 IKBKGQ9Y6K9 419 aa8.68□□□□□ -1.02
TRAF3-209ENST00000560463 EDDM13A0A1B0GTR0 161 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TLDC2A0PJX2 215 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 MROH6A6NGR9 719 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 FAM159BA6NKW6 160 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TRAFD1O14545 582 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TRIM24O15164 1050 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 RGS16O15492 202 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 HTRA2O43464 458 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PGLSO95336 258 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CRTAMO95727 393 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 PRLP01236 227 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 C1QAP02745 245 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 APODP05090 189 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 GRIA2P42262 883 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 MSH2P43246 934 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TNFRSF4P43489 277 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CHRNA4P43681 627 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 POLR2LP62875 67 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 TRAF2Q12933 501 aa8.67□□□□□ -1.02
TRAF3-209ENST00000560463 SKIV2LQ15477 1246 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 SMAD2Q15796 467 aaKnown RBP8.67□□□□□ -1.02
TRAF3-209ENST00000560463 CCDC85BQ15834 202 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms