RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TLE6Q9H808 572 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 FBXO6Q9NRD1 293 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 TREX1Q9NSU2 369 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC39A10Q9ULF5 831 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ARHGAP26Q9UNA1 814 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 SPO11Q9Y5K1 396 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 A8MX80 341 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 HAUS5O94927 633 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 ZWINTO95229 277 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 PRLP01236 227 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 NEFHP12036 1026 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 CR2P20023 1033 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 VIPR2P41587 438 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 ETV4P43268 484 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 RHOAP61586 193 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 SEMG2Q02383 582 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 CGB2Q6NT52 195 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 CCDC63Q8NA47 563 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 SMG7Q92540 1137 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 HDAC10Q969S8 669 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 SEC16BQ96JE7 1060 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 ZFYVE19Q96K21 471 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 DNAJC1Q96KC8 554 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 TBATAQ96M53 351 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF599Q96NL3 588 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 BBS2Q9BXC9 721 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 PRKD2Q9BZL6 878 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 ARNT2Q9HBZ2 717 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 MRPS23Q9Y3D9 190 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 MTF2Q9Y483 593 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 RAI2Q9Y5P3 530 aa10.96□□□□□ -0.65
SNRPA1-211ENST00000560433 PHGDHO43175 533 aaKnown RBP10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 LDB2O43679 373 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 XYLBO75191 536 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 PIGNO95427 931 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 RB1P06400 928 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 ABL2P42684 1182 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 SERPINB9P50453 376 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 ERVK-21P61565 698 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 OVGP1Q12889 678 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 TRAF2Q12933 501 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 MPPE1Q53F39 396 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 ARHGAP15Q53QZ3 475 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 PRSS36Q5K4E3 855 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 TSTD2Q5T7W7 516 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 GRTP1Q5TC63 336 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 PDPK2PQ6A1A2 396 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 CAMK1DQ8IU85 385 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 MFSD6LQ8IWD5 586 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 EFHBQ8N7U6 833 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 MDGA1Q8NFP4 955 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 VPS39Q96JC1 886 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 NDNQ99608 321 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 CCDC134Q9H6E4 229 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF395Q9H8N7 513 aaPredicted RBP10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 BPIFA1Q9NP55 256 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 SNX15Q9NRS6 342 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 LHX3Q9UBR4 397 aa10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 EVLQ9UI08 416 aaPredicted RBP10.96□□□□□ -0.66
SNRPA1-211ENST00000560433 HEATR9A2RTY3 570 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 AP3B1O00203 1094 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 LATS1O95835 1130 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 CTPS1P17812 591 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 BGNP21810 368 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 SPRP35270 261 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 LIMK2P53671 638 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 EPHA5P54756 1037 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 TNK2Q07912 1038 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 THOC5Q13769 683 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 LY6G5CQ5SRR4 150 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 CNSTQ6PJW8 725 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ZCCHC23Q6ZST2 131 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 SLC41A1Q8IVJ1 513 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 RYBPQ8N488 228 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 LRRC8CQ8TDW0 803 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 SORCS1Q8WY21 1168 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF75CPQ92670 426 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 FAM136AQ96C01 138 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 MTBPQ96DY7 904 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 MOCOSQ96EN8 888 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 TRIB3Q96RU7 358 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 TDRD1Q9BXT4 1180 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PITPNM3Q9BZ71 974 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ACSS2Q9NR19 701 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 MARCH4Q9P2E8 410 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PLLPQ9Y342 182 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PCDHB9Q9Y5E1 797 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ATG2AQ2TAZ0 1938 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 EBAG9O00559 213 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 GPR39O43194 453 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ALPIP09923 528 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 IFT88Q13099 833 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PDK4Q16654 411 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 PLEKHG6Q3KR16 790 aa10.95□□□□□ -0.66
SNRPA1-211ENST00000560433 ACCSLQ4AC99 568 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms