RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 C15orf59Q2T9L4 293 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CCDC14Q49A88 953 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CDCP2Q5VXM1 449 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 KDM7AQ6ZMT4 941 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 LSMEM2Q8N112 164 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF548Q8NEK5 533 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 SLC20A1Q8WUM9 679 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 BTN2A2Q8WVV5 523 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CENPIQ92674 756 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 BMFQ96LC9 184 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 C1QTNF7Q9BXJ2 289 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 C1QTNF2Q9BXJ5 285 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 PRORYQ9H606 182 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CDC23Q9UJX2 597 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 MRFAP1Q9Y605 127 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 BPTFQ12830 3046 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 POM121BA6NF01 834 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 EFCAB8A8MWE9 144 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 K7ESM1 405 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 TK2O00142 265 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 NEMP1O14524 444 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 OPA1O60313 960 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 DXOO77932 396 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 LRIG2O94898 1065 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 POP4O95707 220 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 IGSF6O95976 241 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 PAK4O96013 591 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 CALB1P05937 261 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 KRT3P12035 628 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 DESP17661 470 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 HDAC4P56524 1084 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 PFN3P60673 137 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 RAD51Q06609 339 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 PTK2BQ14289 1009 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 FZD2Q14332 565 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 ASTE1Q2TB18 679 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 RYBPQ8N488 228 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 LSM14AQ8ND56 463 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 C3orf20Q8ND61 904 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 FAM172AQ8WUF8 416 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 UBXN4Q92575 508 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 CALR3Q96L12 384 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 BBC3Q96PG8 261 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 SELENOOQ9BVL4 669 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 NDFIP2Q9NV92 336 aa13.75□□□□□ -0.21
SMAD3-214ENST00000560402 IPO11Q9UI26 975 aaKnown RBP13.75□□□□□ -0.21
SMAD3-214ENST00000560402 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 FAM170AA1A519 330 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 BTNL10A8MVZ5 291 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 KRIT1O00522 736 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 TPP1O14773 563 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 RAD51BO15315 384 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 AQP9O43315 295 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-214ENST00000560402 CHRNB2P17787 502 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 GPD1P21695 349 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 ITPKBP27987 946 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 SUOXP51687 545 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 AIF1P55008 147 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
SMAD3-214ENST00000560402 YPEL5P62699 121 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 PTP4A2Q12974 167 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-214ENST00000560402 EFHC2Q5JST6 749 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 IRF2BP2Q7Z5L9 587 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 RTL3Q8N8U3 475 aaKnown RBP13.74□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF248Q8NDW4 579 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 JOSD2Q8TAC2 188 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 GLMNQ92990 594 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 CRELD1Q96HD1 420 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF578Q96N58 590 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-214ENST00000560402 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 SALL4Q9UJQ4 1053 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 JRKLQ9Y4A0 524 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 U3KQA8 63 aa13.74□□□□□ -0.21
SMAD3-214ENST00000560402 LRRK1Q38SD2 2015 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 LRP4O75096 1905 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 TEX51A0A1B0GUA7 166 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 IGLON5A6NGN9 336 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 AREL1O15033 823 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 KDELR3O43731 214 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 TMCC1O94876 653 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 UGT2B4P06133 528 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 H2AFZP0C0S5 128 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 HTR7P34969 479 aa13.73□□□□□ -0.21
SMAD3-214ENST00000560402 THOP1P52888 689 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms