RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PCDH12Q9NPG4 1184 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
SNX1-204ENST00000559061 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 CACNA1EQ15878 2313 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 FAM186AA6NE01 2351 aa11.54□□□□□ -0.56
SNX1-204ENST00000559061 A0A1W2PQU0 124 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 UPK3BL1B0FP48 263 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 UPK3BL2E5RIL1 263 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 RAD51BO15315 384 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 MAP3K13O43283 966 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 ZSCAN12O43309 604 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 RNGTTO60942 597 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 NDUFS2O75306 463 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 TJP3O95049 919 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 FSBPO95073 299 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 PGLSO95336 258 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 WNT1P04628 370 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 LHCGRP22888 699 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 MMP12P39900 470 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 CCR5P51681 352 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 EIF3EP60228 445 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 CREB5Q02930 508 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 SF3A2Q15428 464 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 OASLQ15646 514 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 UGP2Q16851 508 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 TEX44Q53QW1 395 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 KDELC1Q6UW63 502 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 ADAT2Q7Z6V5 191 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 SPATA22Q8NHS9 363 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 HCAR2Q8TDS4 363 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 HTR3CQ8WXA8 447 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 PIGKQ92643 395 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 KLK6Q92876 244 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 FUBP1Q96AE4 644 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 FAM122AQ96E09 287 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 OXNAD1Q96HP4 312 aaPredicted RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 PPP1R16AQ96I34 528 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 SLC6A18Q96N87 628 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 AGAP3Q96P47 875 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 KLF6Q99612 283 aaPredicted RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 POLR1EQ9GZS1 481 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 KDM4CQ9H3R0 1056 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 ATP13A3Q9H7F0 1226 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 CAPN10Q9HC96 672 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 PREBQ9HCU5 417 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 SEPT10Q9P0V9 454 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 AMACRQ9UHK6 382 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 EIF2B4Q9UI10 523 aaKnown RBP11.53□□□□□ -0.56
SNX1-204ENST00000559061 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 NCKAP1Q9Y2A7 1128 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 CA5BQ9Y2D0 317 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 PCDHGA5Q9Y5G8 931 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 RAI2Q9Y5P3 530 aa11.53□□□□□ -0.56
SNX1-204ENST00000559061 LRP4O75096 1905 aa11.52□□□□□ -0.56
SNX1-204ENST00000559061 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.56
SNX1-204ENST00000559061 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
SNX1-204ENST00000559061 A0A1W2PPC4 97 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 A0A1W2PR77 199 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 HACD1B0YJ81 288 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 F5H423 210 aaPredicted RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 LIASO43766 372 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 SOCS5O75159 536 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 MT-CYBP00156 380 aaPredicted RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 RBP3P10745 1247 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 PRLRP16471 622 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 NFKB1P19838 968 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 SERPINA4P29622 427 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 MAT2AP31153 395 aaKnown RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 CD86P42081 329 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 BCL2L1Q07817 233 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 CDKN3Q16667 212 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 TMEM52BQ4KMG9 183 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 RALGPS1Q5JS13 557 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 FBXL19Q6PCT2 694 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 HORMAD1Q86X24 394 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 SYT12Q8IV01 421 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 KLHDC8BQ8IXV7 354 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 ZCCHC9Q8N567 271 aaKnown RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 GLIS1Q8NBF1 620 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 TMEM145Q8NBT3 493 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 RUBCNQ92622 972 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 MS4A14Q96JA4 679 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 RBM15Q96T37 977 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX1-204ENST00000559061 MLPHQ9BV36 600 aaPredicted RBP11.52□□□□□ -0.57
SNX1-204ENST00000559061 GLOD4Q9HC38 313 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 FZD3Q9NPG1 666 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 SEMA4GQ9NTN9 838 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 JRKLQ9Y4A0 524 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 TTLL3Q9Y4R7 772 aa11.52□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3DA0A087WVF3 549 aa11.51□□□□□ -0.57
SNX1-204ENST00000559061 TBC1D3IA0A087WXS9 549 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms