RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ENPP2Q13822 863 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 EIF4HQ15056 248 aaKnown RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 MYLK3Q32MK0 819 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CCDC38Q502W7 563 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CARD16Q5EG05 197 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 LRRC8BQ6P9F7 803 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CENPUQ71F23 418 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CHPFQ8IZ52 775 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 BBS5Q8N3I7 341 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 DNAAF3Q8N9W5 541 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.86□□□□□ -0.678e-7■■■■■ 32.1
TDP1-211ENST00000555178 NUDCD1Q96RS6 583 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 ZDHHC6Q9H6R6 413 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CASS4Q9NQ75 786 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 WNT16Q9UBV4 365 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 DMDP11532 3685 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 A0A1W2PQF6 199 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 PI15O43692 258 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SHBGP04278 402 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 ASLP04424 464 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 ATXN1LP0C7T5 689 aaKnown RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 SLC8A1P32418 973 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 GRSF1Q12849 480 aaKnown RBP eCLIP10.86□□□□□ -0.67
TDP1-211ENST00000555178 MPP3Q13368 585 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 UBXN2BQ14CS0 331 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 CES3Q6UWW8 571 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 PDCD6IPQ8WUM4 868 aaKnown RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 CFAP36Q96G28 342 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SIGLEC10Q96LC7 697 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 TRIB3Q96RU7 358 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 LMAN1LQ9HAT1 526 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 MAD1L1Q9Y6D9 718 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 WDR87Q6ZQQ6 2873 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 FAM170BA6NMN3 283 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 TRAFD1O14545 582 aaPredicted RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 RIPK2O43353 540 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 LEFTY1O75610 366 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 UGT2B4P06133 528 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SERPINF2P08697 491 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 DRD1P21728 446 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SSTR1P30872 391 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 GEMIN4P57678 1058 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 STARD6P59095 220 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 GPX6P59796 221 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ZXDAP98168 799 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 NSUN2Q08J23 767 aaKnown RBP eCLIP10.85□□□□□ -0.67
TDP1-211ENST00000555178 POU6F1Q14863 301 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SIRPB2Q5JXA9 342 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 RANBP10Q6VN20 620 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ZNF852Q6ZMS4 543 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 MREGQ8N565 214 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 PCDH20Q8N6Y1 951 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 ISG20Q96AZ6 181 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 TDRD1Q9BXT4 1180 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 TBC1D17Q9HA65 648 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 XAB2Q9HCS7 855 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 LTB4R2Q9NPC1 389 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 RAI2Q9Y5P3 530 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ERI2A8K979 691 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 A8MX80 341 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SMAPO00193 183 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ALOX15BO15296 676 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 TIMM44O43615 452 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 DCNP07585 359 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 COPAP53621 1224 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ST8SIA6P61647 398 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 FAM193AP78312 1265 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 CDK16Q00536 496 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 SLC29A2Q14542 456 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SLMAPQ14BN4 828 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 SLC1A5Q15758 541 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 TMEM31Q5JXX7 168 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 NAPEPLDQ6IQ20 393 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 UNC5BQ8IZJ1 945 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 ZNF778Q96MU6 729 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 CEP44Q9C0F1 390 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
TDP1-211ENST00000555178 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
TDP1-211ENST00000555178 LOC285095A0A1B0GVY8 99 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 KANSL1LA0AUZ9 987 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GOLGA6CA6NDK9 693 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GOLGA6BA6NDN3 693 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 NDC80O14777 642 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 AURKAO14965 403 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 FZD6O60353 706 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 IGSF6O95976 241 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GSRP00390 522 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 ALPIP09923 528 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GOLGA6DP0CG33 693 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms