RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 PEX26Q7Z412 305 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 CEP76Q8TAP6 659 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 ARRDC2Q8TBH0 407 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 ECHDC3Q96DC8 303 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 SERAC1Q96JX3 654 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 SEMA3CQ99985 751 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 WRAP53Q9BUR4 548 aaKnown RBP12.47□□□□□ -0.41
SYNE2-214ENST00000554928 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
SYNE2-214ENST00000554928 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 PCDH12Q9NPG4 1184 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 LZTFL1Q9NQ48 299 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 DKK3Q9UBP4 350 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 AMFRQ9UKV5 643 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 DOCK9Q9BZ29 2069 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 UPK3BL1B0FP48 263 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 UPK3BL2E5RIL1 263 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 AP1G1O43747 822 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 MMP20O60882 483 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 MMP2P08253 660 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 GNSP15586 552 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 MX2P20592 715 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 RENBPP51606 427 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 RWDD2BP57060 319 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 AP1S1P61966 158 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 BCL2L1Q07817 233 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ITKQ08881 620 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 RALGDSQ12967 914 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 TFDP2Q14188 446 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 PRKD1Q15139 912 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-214ENST00000554928 PPP2R5EQ16537 467 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 UGP2Q16851 508 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 PRPF39Q86UA1 669 aaKnown RBP12.46□□□□□ -0.41
SYNE2-214ENST00000554928 LRRC49Q8IUZ0 686 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 FATE1Q969F0 183 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF641Q96N77 438 aaPredicted RBP12.46□□□□□ -0.41
SYNE2-214ENST00000554928 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 OSBPL8Q9BZF1 889 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 AASDHPPTQ9NRN7 309 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 SUSD2Q9UGT4 822 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ANKRD6Q9Y2G4 727 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 COQ6Q9Y2Z9 468 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 SHROOM3Q8TF72 1996 aa12.46□□□□□ -0.41
SYNE2-214ENST00000554928 ADAMTS9Q9P2N4 1935 aa12.46□□□□□ -0.42
SYNE2-214ENST00000554928 TCRBV7S2A1N4TA0A589 114 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 CCDC66A2RUB6 948 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 DCDC2BA2VCK2 349 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 A8MX80 341 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 SLC30A4O14863 429 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TM4SF5O14894 197 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 HTRA2O43464 458 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PAK4O96013 591 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PDHA1P08559 390 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 GM2AP17900 193 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TGM2P21980 687 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 SERPINA4P29622 427 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 DPP6P42658 865 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 GRIA4P48058 902 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 RACK1P63244 317 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 IFI35P80217 286 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PDK1Q15118 436 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 UAP1L1Q3KQV9 507 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TPRG1LQ5T0D9 272 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 ALG1LQ6GMV1 187 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 NAPEPLDQ6IQ20 393 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TIGD7Q6NT04 549 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 ZC3H18Q86VM9 953 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TMEM145Q8NBT3 493 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 NETO1Q8TDF5 533 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 NSMCE1Q8WV22 266 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 HES6Q96HZ4 224 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 CALR3Q96L12 384 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 KLF6Q99612 283 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 DLL3Q9NYJ7 618 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 FNDC3AQ9Y2H6 1198 aaKnown RBP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.45□□□□□ -0.42
SYNE2-214ENST00000554928 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
SYNE2-214ENST00000554928 PI4KAP42356 2102 aa12.44□□□□□ -0.42
SYNE2-214ENST00000554928 PRR5-ARHGAP8B1AHC4 643 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms