RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 WDTC1Q8N5D0 677 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ZMIZ2Q8NF64 920 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 TMEM174Q8WUU8 243 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ATOH1Q92858 354 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 INTS12Q96CB8 462 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 RSRC1Q96IZ7 334 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 TIGD1Q96MW7 591 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 CAMK1GQ96NX5 476 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 TEFMQ96QE5 360 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 B3GNT4Q9C0J1 378 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 POLR1BQ9H9Y6 1135 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ENTPD7Q9NQZ7 604 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 GRHL1Q9NZI5 618 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 MPP6Q9NZW5 540 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 KIAA1456Q9P272 454 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 LIMA1Q9UHB6 759 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 VPS28Q9UK41 221 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 INTS6Q9UL03 887 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ZNF215Q9UL58 517 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 PCDHGB4Q9UN71 923 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 PCDHGB5Q9Y5G0 923 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 SLC4A4Q9Y6R1 1079 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 HNRNPCL1O60812 293 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 TMCC1O94876 653 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 KLKB1P03952 638 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 SLC2A4P14672 509 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 POU1F1P28069 291 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 PPARGP37231 505 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 RASSF2P50749 326 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 CLCN5P51795 746 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 EIF3BP55884 814 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 CLDN2P57739 230 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 NUCB1Q02818 461 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 FRG1Q14331 258 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 VEPH1Q14D04 833 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 PPP2R5BQ15173 497 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 TAF11Q15544 211 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 SERTAD4-AS1Q5TG53 156 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 TMEM71Q6P5X7 295 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 ENOSF1Q7L5Y1 443 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 KIAA2013Q8IYS2 634 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 CADM3Q8N126 398 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 TMEM199Q8N511 208 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 DPP10Q8N608 796 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 FRMD1Q8N878 549 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 LRRC57Q8N9N7 239 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 NOC3LQ8WTT2 800 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 PABPC5Q96DU9 382 aaKnown RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 TREX2Q9BQ50 279 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 WDR77Q9BQA1 342 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-213ENST00000554776 KLHL31Q9H511 634 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 SCPEP1Q9HB40 452 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 CLIC5Q9NZA1 410 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 FBXO40Q9UH90 709 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 CLDN16Q9Y5I7 305 aa3.27□□□□□ -1.89
SCFD1-213ENST00000554776 hCG_1807616A0A1W2PRN6 198 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 FAM90A8PA6NJQ4 464 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 KRTAP29-1A8MX34 341 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 BTBD18B2RXH4 712 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 EIF3CLB5ME19 914 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 FAM157AC9JC47 383 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 H0YGN5 161 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 GTPBP1O00178 669 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 TIMM44O43615 452 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 SEC14L2O76054 403 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ALPLP05186 524 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 FAM90A13PP0C7W8 464 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 FAM90A24PP0C7X0 464 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CHRNB2P17787 502 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 TTKP33981 857 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CPOXP36551 454 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 RAD52P43351 418 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 THBS3P49746 956 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 GNAQP50148 359 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 HTR6P50406 440 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CLCNKBP51801 687 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CLNS1AP54105 237 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 P2RX3P56373 397 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 NLRP5P59047 1200 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 SELENOVP59797 346 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 NANOS2P60321 138 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 RPL7AP62424 266 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 OLR1P78380 273 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 MC1RQ01726 317 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CREB5Q02930 508 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 SLC18A2Q05940 514 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 PPATQ06203 517 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 GRIK3Q13003 919 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 DUSP6Q16828 381 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ALG11Q2TAA5 492 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 COL28A1Q2UY09 1125 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 RILPL1Q5EBL4 403 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 Q5PR19 223 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 CES5AQ6NT32 575 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ZNF549Q6P9A3 640 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 PARM1Q6UWI2 310 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms