RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DOCK8Q8NF50 2099 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CCDC195A0A1B0GUA6 201 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 UBA6A0AVT1 1052 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF840PA6NDX5 716 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 C2CD4BA6NLJ0 364 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZSCAN12O43309 604 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 HSF2BPO75031 334 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DAB1O75553 588 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 MOCS3O95396 460 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 KRT3P12035 628 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF28P17035 718 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CCR2P41597 374 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 SLURP1P55000 103 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 RNASE9P60153 205 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 YWHAGP61981 247 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 PITX1P78337 314 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 NTHL1P78549 312 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 KIF5AQ12840 1032 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 INAVAQ3KP66 663 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 EFHC1Q5JVL4 640 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 OTUD1Q5VV17 481 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 BSPRYQ5W0U4 402 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ANKRD54Q6NXT1 300 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 SYCE2Q6PIF2 218 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ARCQ7LC44 396 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ITIH5Q86UX2 942 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 MON1AQ86VX9 555 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 RHOT2Q8IXI1 618 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZZZ3Q8IYH5 903 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DEFB106AQ8N104 65 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 BCL6BQ8N143 479 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 EMC1Q8N766 993 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CNTD1Q8N815 330 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CMASQ8NFW8 434 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF564Q8TBZ8 553 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 RXFP2Q8WXD0 754 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CASP10Q92851 521 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 FAM149B1Q96BN6 582 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 C20orf173Q96LM9 149 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF512Q96ME7 567 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 GUCD1Q96NT3 240 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 MCEEQ96PE7 176 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CDX2Q99626 313 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DDX23Q9BUQ8 820 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 BTBD2Q9BX70 525 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 OR10A5Q9H207 317 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 SFXN1Q9H9B4 322 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 POPDC2Q9HBU9 364 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 MRPL47Q9HD33 250 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 LZTFL1Q9NQ48 299 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DDX56Q9NY93 547 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DNMT3BQ9UBC3 853 aaKnown RBP6.53□□□□□ -1.36
SCFD1-212ENST00000554486 DPP7Q9UHL4 492 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 ANAPC7Q9UJX3 599 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 TMPRSS11EQ9UL52 423 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 GUCA1BQ9UMX6 200 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 NAALADL1Q9UQQ1 740 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 SCINQ9Y6U3 715 aa6.53□□□□□ -1.36
SCFD1-212ENST00000554486 C5orf42Q9H799 3197 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MACROD2A1Z1Q3 448 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 GRID2IPA4D2P6 1211 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 OTOL1A6NHN0 477 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 B8ZZF3 427 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 BUB1O43683 1085 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 KRT86O43790 486 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TBX10O75333 385 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MOSPD3O75425 235 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 KLHL18O94889 574 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TBX18O95935 607 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 OAS1P00973 400 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 IGLV3-25P01717 112 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RHOP08100 348 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MYL4P12829 197 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RARGP13631 454 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 PDGFRAP16234 1089 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 GABRR2P28476 465 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MATKP42679 507 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 YWHAZP63104 245 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CD83Q01151 205 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MESDQ14696 234 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TAF12Q16514 161 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SLC5A9Q2M3M2 681 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 C15orf59Q2T9L4 293 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CCDC14Q49A88 953 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ARHGAP29Q52LW3 1261 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RAB6CQ53S08 254 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 DCAF6Q58WW2 860 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RARS2Q5T160 578 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SNX30Q5VWJ9 437 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SYPL2Q5VXT5 272 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MSANTD2Q6P1R3 559 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 DCUN1D2Q6PH85 259 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 BNIPLQ7Z465 357 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 GRASPQ7Z6J2 395 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms