RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 DNAJC1Q96KC8 554 aaKnown RBP21.11■□□□□ 0.97
PRDM4-205ENST00000550376 PPP1R2P1Q96PQ5 205 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 C1QTNF1Q9BXJ1 281 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 SHCBP1LQ9BZQ2 653 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 NMUR2Q9GZQ4 415 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 FNDC3AQ9Y2H6 1198 aaKnown RBP21.11■□□□□ 0.97
PRDM4-205ENST00000550376 CRYL1Q9Y2S2 319 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 XIRP2A4UGR9 3374 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 KDELR3O43731 214 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 LILRB3O75022 631 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 CXCL14O95715 111 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 SBK3P0C264 359 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 CCDC15Q0P6D6 951 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 CYTH1Q15438 398 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 INSCQ1MX18 579 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 VWA5B1Q5TIE3 1220 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 ARL8BQ9NVJ2 186 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
PRDM4-205ENST00000550376 LCHNA4D1U4 455 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 MT-CO1P00395 513 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 SERPINF2P08697 491 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 CTC1Q2NKJ3 1217 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 CYB5D1Q6P9G0 228 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 FBXO46Q6PJ61 603 aaPredicted RBP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 TMEM151AQ8N4L1 468 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 SORT1Q99523 831 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 OLFM1Q99784 485 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 A0A1B0GVM2 712 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 A0A1W2PRU2 124 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 TCAF2A6NFQ2 919 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 MROH6A6NGR9 719 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 K7ERQ8 282 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 HNRNPH1P31943 449 aaKnown RBP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 SLC8A1P32418 973 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 PRAMEP78395 509 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 ELF3P78545 371 aaPredicted RBP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 ARF5P84085 180 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 TPGS1Q6ZTW0 290 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 PTCD2Q8WV60 388 aaKnown RBP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 RMDN1Q96DB5 314 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 MRM3Q9HC36 420 aaKnown RBP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.1■□□□□ 0.97
PRDM4-205ENST00000550376 CLEC4EQ9ULY5 219 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 SPO11Q9Y5K1 396 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 ANAPC1Q9H1A4 1944 aa21.1■□□□□ 0.97
PRDM4-205ENST00000550376 GREM1O60565 184 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 CD160O95971 181 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 CKMP06732 381 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 LINC00271P0C7V0 271 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 NQO1P15559 274 aaKnown RBP21.09■□□□□ 0.97
PRDM4-205ENST00000550376 CD151P48509 253 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 ERVFC1P60507 584 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 USP4Q13107 963 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 ASRGL1Q7L266 308 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 NECAB2Q7Z6G3 386 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 CEP295NLQ96MC4 621 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 PRKD2Q9BZL6 878 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 KLC4Q9NSK0 619 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 HCFC1R1Q9NWW0 138 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 HIDE1A8MVS5 230 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 STMN1P16949 149 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 CCDC117Q8IWD4 279 aaPredicted RBP21.09■□□□□ 0.97
PRDM4-205ENST00000550376 FSTL5Q8N475 847 aaPredicted RBP21.09■□□□□ 0.97
PRDM4-205ENST00000550376 OR6K2Q8NGY2 324 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 RILPQ96NA2 401 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 PSKH2Q96QS6 385 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 MGME1Q9BQP7 344 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 ACE2Q9BYF1 805 aaPredicted RBP21.09■□□□□ 0.97
PRDM4-205ENST00000550376 SEPT3Q9UH03 358 aa21.09■□□□□ 0.97
PRDM4-205ENST00000550376 FCF1Q9Y324 198 aaKnown RBP21.09■□□□□ 0.97
PRDM4-205ENST00000550376 ILVBLA1L0T0 632 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 SERPINE1P05121 402 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 RAB10P61026 200 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 CCDC153Q494R4 210 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 BADQ92934 168 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 SKA1Q96BD8 255 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 TMA16Q96EY4 203 aaKnown RBP21.08■□□□□ 0.97
PRDM4-205ENST00000550376 ZBP1Q9H171 429 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 NSMCE4AQ9NXX6 385 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 HSFX1Q9UBD0 423 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 ACOT9Q9Y305 439 aa21.08■□□□□ 0.97
PRDM4-205ENST00000550376 FCHO1O14526 889 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 CSRP3P50461 194 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 ALDH18A1P54886 795 aaKnown RBP21.08■□□□□ 0.96
PRDM4-205ENST00000550376 ACBD5Q5T8D3 534 aaPredicted RBP21.08■□□□□ 0.96
PRDM4-205ENST00000550376 MAVSQ7Z434 540 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 ZNF398Q8TD17 642 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 SLC7A6OSQ96CW6 309 aaPredicted RBP21.08■□□□□ 0.96
PRDM4-205ENST00000550376 PPP1R36Q96LQ0 422 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 CORO1BQ9BR76 489 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 VPS28Q9UK41 221 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 TBC1D30Q9Y2I9 924 aa21.08■□□□□ 0.96
PRDM4-205ENST00000550376 CCL16O15467 120 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CHRNGP07510 517 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 MYL4P12829 197 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 CPA2P48052 419 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 TNK2Q07912 1038 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 SLC12A1Q13621 1099 aa21.07■□□□□ 0.96
PRDM4-205ENST00000550376 SEMA3AQ14563 771 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms